Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05359 ATGGTGCCCCAAATTCATACCTTATATATACCCCACTCATCATTCTTCTATTTCAAGCCAGAAAACTTCCTCATAACATCAATGATGTTTAGTACTCTAATTTCAAGTGTGTATTTGGTTTCAATAATATTCACACTACTAGCTTTAATTGGAGGATATCTCTATGGGCCATTTTGGAGGTTAAGGAAAGTTCCAGGCCCACCATCTCTTCCACTGGTAGGACACCTTCCATTGTTAGCAAAGTATGGCCCTGATGTGTTCTCAATCCTTTCCAAGCAATATGGCCCAATTTACAGATTTCATATGGGAAGACAACCTCTTATAATCATAGCAGATGCAGAGCTATGTAGAGAAGTTGGAATCAAAAAATTCAAAAACCTTTCAAATAGAAGCATTCCTTCTCCTATCTCTGCTTCTCCTCTTCACCAAAAAGGTTTATTCTTCACAAGAGATTTGCAATGGTCTACGATGAGAAATACTATATTATCGGTATACCAACCATCACACTTAGCCAACTTAGTGCCAAAAATGCAATCAGTTATAGAATCTGCAACACAAAATCTTGACACACAAAAAGAAGACATAATCTTTTCAAATCTTTCCCTAAGACTAGCAACTGATATAATTGGAGATGCAGCATTTGGAGTCAACTTTGGTCTCTCTAAGCCTCAATCAATTTGTGAATCAATGAGCAATGTTAACAATGTAGAACATTCAAGTGCTAGTAATGATGAAGTATCAAATTTCATCAATCAACATATTTACTCCACAACACAACTTAAGATGGATTTGTCGGGTTCGTTTTCGATTATAATTGGCCTAATTGCTCCAATACTTCAAGAGCCATTTAGGCAGATTCTTAAGAGAATACCCGGCACTATGGATTGGAAAATGGAATGTACTAATAGAAATTTAACCGGTCGTCTTGATGAGATTGTTAAGAAGAGAATGGAAGATAAGAATCGAAGAACTTCGAAGAATTTCTTGTCGCTTATATTGAATGCTAGAGAATCAAAAAGTGTTTCGGAGAATGTGTTTTCGTTCGATCACATAAGCGCGGTTACTTATGAACATTTACTTGCTGGATCAGCTACGACATCTTTTACTTTGTCATCTATTGTTTATTTGGTTGCTGGTCACATAAATGTTGAAAGAAAATTGCTTCAAGAGATTGATGAGTTTGGAACACATGATAGGATACCTAATGCTAAAGATCTTAATGAAAGTTTTCCTTATATTGATCAGGTGATTAAAGAGGCAATGAGGATTTACACTGTCTCTCCATTGGTTGCAAGAGAAACATCAAATGAAGTAGAGATAGGAGGTTACCTTCTTCCAAAGGGAACATGGGTATGGTTAGCACTCGGAGTTCTAGCAAAAGACTCAAGAAACTTTGCAGAGCCAGAGAAATTCAAACCGGAGAGATTTGATCCCAAATGTGAAGAAATGAAAAGAAGGCATCCTTATGCATTCATACCATTTGGAATTGGTCCAAGAGCATGTATTGGCCAGAAATTTTCATTGCAAGAGATCAAGCTTACTTTGATTCATTTGTATAGAAAATATGTATTTCGTCATTCACTTAGCATGGAAAAACCTATAGAACTTGAATATGGTTTAGTTCTTAATTTCAAGCATGGTGTCAAGCTTAGAGTAATAAAAAGAGCATAA 1671 0.3603 MVPQIHTLYIPHSSFFYFKPENFLITSMMFSTLISSVYLVSIIFTLLALIGGYLYGPFWRLRKVPGPPSLPLVGHLPLLAKYGPDVFSILSKQYGPIYRFHMGRQPLIIIADAELCREVGIKKFKNLSNRSIPSPISASPLHQKGLFFTRDLQWSTMRNTILSVYQPSHLANLVPKMQSVIESATQNLDTQKEDIIFSNLSLRLATDIIGDAAFGVNFGLSKPQSICESMSNVNNVEHSSASNDEVSNFINQHIYSTTQLKMDLSGSFSIIIGLIAPILQEPFRQILKRIPGTMDWKMECTNRNLTGRLDEIVKKRMEDKNRRTSKNFLSLILNARESKSVSENVFSFDHISAVTYEHLLAGSATTSFTLSSIVYLVAGHINVERKLLQEIDEFGTHDRIPNAKDLNESFPYIDQVIKEAMRIYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDSRNFAEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLTLIHLYRKYVFRHSLSMEKPIELEYGLVLNFKHGVKLRVIKRA 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05359 556 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 494 503 IPR017972 GO:0005506|GO:0016705
Vivi4g05359 556 PRINTS P450 superfamily signature 492 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 PRINTS P450 superfamily signature 501 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 PRINTS P450 superfamily signature 361 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 Pfam Cytochrome P450 65 542 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 PRINTS E-class P450 group I signature 370 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 PRINTS E-class P450 group I signature 414 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 PRINTS E-class P450 group I signature 350 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 PRINTS E-class P450 group I signature 491 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 PRINTS E-class P450 group I signature 454 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 PRINTS E-class P450 group I signature 501 524 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 SUPERFAMILY Cytochrome P450 58 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 Gene3D Cytochrome P450 55 556 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05359 556 PANTHER THROMBOXANE-A SYNTHASE 35 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05359 Vivi-Chr4 186983987 186987079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05359 102 555 Cytochrome P450 AT2G26170 71.586 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05359 K20771 - gmx:100805689 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05359 4 186983987 186987079 Vivi3g01684 3 27345263 27349778 PCT