Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05347 ATGTTTTTGCTGTTGCTGACGCATCTTATAGGTAAAAGTCAATCTATCTTGGTAAGCGGTGAAAGTGGCGCTGGAAAAACTGAGACTACAAAATTGATTATGCAATATCTTACTTTTGTTGGTGGCCGTGCCTCTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCACTTTTAGAGGCATTTGGCAATGCAAGGACTGTTAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATAGAAATGGTAGAATATCCGGTGCTGCAATCAGAACTTACTTATTAGAAAGATCACGAGTTGTTCAGATAACGGATCCAGAAAGAAATTATCACTGCTTCTATCAGTTGTGTGCCTCTGAAAGGGATGCAGAGGAGTATAAATTAGGACATCCAAGTCATTTTCACTATTTAAATCAAAGTAAAGTCTATGAACTAAACGGTGTAAGCAATGCCGAAGAATATATGAAAACGAGGAGGGCAATGGATATTGTTGGCATCAGTCTCGAGGATCAGGAAGCGATATTTCGTGTCTTAGCTGCAATTTTGCACTTGGGAAATGTTGAATTTTCTCCTGGAAAAGAGCATGACTCATCAGTAATAAAGGATGAAAAATCAAGATTTCATATGGAGATGGCTGCTGATCTTTTCATGTGTGATGTAGACCTACTGCTGGCAACATTGTGTACTCGATCAATACAAACTCGAGAAGGAAATATTATCAAGGCCCTTGATTGTAATGCTGCTGTTGCTGGTCGGGATACTTTGGCGAAAACAGTTTATGCTCGTTTATTTGATTGGCTTGTTGATAAGATCAATAGATCTGTTGGACAAGATGTCAATTCCCACATGCAAATTGGAGTTTTGGATATTTATGGTTTTGAGTGCTTTAAGAATAATAGTTTTGAGCAATTCTGTATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAAATGGAGCAAGAGGAGTATGGCAAAGAAAAAATTAACTGGAGTTACATTGAATTTGTGGACAACCAAGATGTTCTAGATTTGATCGAGAAGAAACCCATTGGTGTCATTGCTCTGTTGGATGAAGCTTGCATGTTTCCAAAATCAACACATGAAACATTCTCTACCAAGTTGTTTCAGCATTTCCGGTCTCACCCTAGGTTGGAAAAGGAAAAGTTTTCACAAACAGATTTTATAGTTTCTCATTATGCTGGAAAGGTCACATATCATACAAATAGCTTTTTGGACAAAAATCGTGACTATATTGTTGTGGAACATTGTAATCTATTAACTTCTTCACGTTGCTCTTTTGTGTCCGGTCTTTTCCCTTTGCTACCAGAGGAATCTTCAAGATCATCCTACAAGTTTTCTTCAGTAGCTACGAGATTTAAGCAACAACTTCAAGCACTCATGGAGACCCTCAAGTCAACAGAGCCTCATTACATACGATGCGTGAAGCCAAATTCATTGAATCAACCACAAATGTTTGAGAATGCAAGCATCATACATCAATTACGCTGCGGGGGTGTCCTTGAAGCTATTCGGATAAGTCTGGCAGGTTACCCCACCCGGAGAACGTATTCAGAGTTTGTTGATCGCTATGGGTTAATATGCCCTGAGTTTTTTGATGGAAGTTATGACGATAAAGCTGCAACTGAGAAAATTTTACATAAGCTCAAGCTTGGGAATTTTCAGTTGGGCAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTGGTGTTTTGGACTCCAAGCGTGCTGAAGTTTTGGACAACGCTGCTAAGTATATTCAGCGCCAACTGAAGACATTTATTACACGCAAGCATTTCATTTCTGTAAGAGCAGCTGCAGTTTCTCTTCAGGCATGCTGCAGGGGATACATTGCCCAAAAGATGTATGCCGCTAAAAGGGAAACAGCAGCAGCTATCTCCATTCAAAAGAATATACGTATGTGGCTAACGAGGCATGCATATATGAAACTATATTCCTCTGCCATTATCATTCAATCGCATGTTCGGGGTTTCATTACTCTTCAAAGATTCTTGCATGAAAAAGAATGTAGAGCTGCTATATCTATTCAGGCTTGTTGGAGGATGTACAATGTTAGATCGGCTTTCCGGCGATATCTTGCTTCAATTGTGGCAGTACAATGTTTATGGCGCTGTAGACAAGCAAAAAGGGAGTTTCGTAGACGTAAACAAGAGGCTAATGAATCTGGAGCCCTCCGGCTGGCTAAAACTAAACTTGAGAAGCAAATGGAAGAGCTCACATGGCGTTTGCATCTAGAAAAGAAAATAAGGGTTTCTAATGAAGAGGCCAAGCAAAGAGAGATTTCCACACTTCGAAAAATGTTAGAAGCTCTGAATCTTGAATTAGATACGGCCAAACTGGCTACAATTAATGAGTGCAACAAGAATGCTGTTCTGCAAAATCAATTGGAATTGTCAGCCAAAGAGAAATCTGCTTTAAAGAGAGAGCTAGTTACAGTGCATGAATTACGAACGGAAAATGCTATGCTAAAGGTTTCACTGGATGCCTTTGAGAAGAAGTACAAATCTTTAGAGGTCGAGCATATAAATGCTAAAAAAGGCCAAGACAAAACCATTGAGAAACTGAGGGAATTTGAACAGAAGTGCTCTCAGCTCGAGCAAAATGTAAAAAGCCTTGAGGAAAAGCTATTAAGTTCGGAGAATGAAAATCAATTGCTTCGTCAAAAAGCCTTAAGTGCTCCTCGTAAGAGTAACCGCTTAGGTCTTGCAAAGTCTTTTTCAGAAAAATACTCAACTCCAATAGCCTCCCGCACTGAGCGAAAGCCCGTATTTGAGACACCCACGCCCACAAAACTTGCTGTCCCTTTTACGCTAGCAATGTCAGACTCTCATCGATCAAAGTCAACAGCAGAAAGGCACCAGGACAATTACGAATTCCTCTCTAGATGCATCAAGGAGAATTTGGGATTCAAAAATGGTAAACCTATTGCAGCTCGTATCATATACAAATGTCTTCTTCAGTGGCATGCTTTTGAATCTGAGCGCACCGCCATTTTCGATTACATTATTGAAGGCATAAATGACGTTCTAAAGGTTAGGGAAGATGACATTGTCTGGCCATATTGGCTGTCCAATACTTCTGCTCTTCTTTGCCTCTTACAGAGAAACTTACGTTCAAATGGATTTTTAATTACCAATGGACAACGTTATACTGGAGCATCTGGCTTGACCGGCAGAACTGGGCATGGACCAAAATCTCCATTTAAGTTTATTGGATATGATGATGGTATGTCTCATGTGGAGGCAAGATATCCAGCTATACTTTTCAAGCAACAACTAACTGCATGTGTTGAGAAAATTTTTGGGCTTCTACGCGATAATTTGAAAAAAGAGCTTTCTCCTCTTCTGCAACTATGTATTCAGACACCCAAAGCAGGAAGAGTGCATGGTGGAAAATCATCTAGATCTCCTGTTGGGCTTTCTCAACAATCATCTGGTAGTCAATGGGACAATATTGTCAAATTTTTGGATTCACTAATGAGCAAACTTCGTGGAAATCATGTTCCACCCTTCTTCATTCGTAAACTAGTTACCCAAGTTTTTTCCTTCATCAATATTACACTCTTCAACAGTCTTCTTTTACGGCGTGAATGTTGCACATTCTCCAATGGTGAATACATGAAATCTGGTCTCGCAGAACTAGAGAAATGGATAGCCAATGCAAAGGAGATGTATGCAGGAACGTCTTGGCAAGAGCTGAATTATATAAGGCAAGCTGTTGGGTTCTTGGTAATACATCAGAAGAGGAAAAAATCTTTGGAAGAAATTCGACAGGATCTTTGTCCGGCGTTGACTGTAAGACAAATCTATCGAATCAGTACTATGTACTGGGATGACAAGTATGGAACTCAGAGTGTGTCCAATGAGGTAGTTAGTGTAATGAGGGAAATGGTTAACAAGGACAATCATAATATGACCTCAAATTCTTTCCTATTGGATGATGATCTGAGCATTCCTTTCACTGCGGAAGACGTAGATATGGCAATCCCTCCTATAGATTTGGACGAGATTGATCTCCCATTATTCGTGTCGGATTATTCTTGTGCACACTTTCTTAATTCAAAACAGGAATAG 4152 0.396 MFLLLLTHLIGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRASGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDRNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDAEEYKLGHPSHFHYLNQSKVYELNGVSNAEEYMKTRRAMDIVGISLEDQEAIFRVLAAILHLGNVEFSPGKEHDSSVIKDEKSRFHMEMAADLFMCDVDLLLATLCTRSIQTREGNIIKALDCNAAVAGRDTLAKTVYARLFDWLVDKINRSVGQDVNSHMQIGVLDIYGFECFKNNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEKINWSYIEFVDNQDVLDLIEKKPIGVIALLDEACMFPKSTHETFSTKLFQHFRSHPRLEKEKFSQTDFIVSHYAGKVTYHTNSFLDKNRDYIVVEHCNLLTSSRCSFVSGLFPLLPEESSRSSYKFSSVATRFKQQLQALMETLKSTEPHYIRCVKPNSLNQPQMFENASIIHQLRCGGVLEAIRISLAGYPTRRTYSEFVDRYGLICPEFFDGSYDDKAATEKILHKLKLGNFQLGRTKVFLRAGQIGVLDSKRAEVLDNAAKYIQRQLKTFITRKHFISVRAAAVSLQACCRGYIAQKMYAAKRETAAAISIQKNIRMWLTRHAYMKLYSSAIIIQSHVRGFITLQRFLHEKECRAAISIQACWRMYNVRSAFRRYLASIVAVQCLWRCRQAKREFRRRKQEANESGALRLAKTKLEKQMEELTWRLHLEKKIRVSNEEAKQREISTLRKMLEALNLELDTAKLATINECNKNAVLQNQLELSAKEKSALKRELVTVHELRTENAMLKVSLDAFEKKYKSLEVEHINAKKGQDKTIEKLREFEQKCSQLEQNVKSLEEKLLSSENENQLLRQKALSAPRKSNRLGLAKSFSEKYSTPIASRTERKPVFETPTPTKLAVPFTLAMSDSHRSKSTAERHQDNYEFLSRCIKENLGFKNGKPIAARIIYKCLLQWHAFESERTAIFDYIIEGINDVLKVREDDIVWPYWLSNTSALLCLLQRNLRSNGFLITNGQRYTGASGLTGRTGHGPKSPFKFIGYDDGMSHVEARYPAILFKQQLTACVEKIFGLLRDNLKKELSPLLQLCIQTPKAGRVHGGKSSRSPVGLSQQSSGSQWDNIVKFLDSLMSKLRGNHVPPFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYMKSGLAELEKWIANAKEMYAGTSWQELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSVMREMVNKDNHNMTSNSFLLDDDLSIPFTAEDVDMAIPPIDLDEIDLPLFVSDYSCAHFLNSKQE 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05347 1383 Gene3D - 116 173 - -
Vivi4g05347 1383 ProSiteProfiles Dilute domain profile. 1026 1326 IPR002710 -
Vivi4g05347 1383 ProSiteProfiles IQ motif profile. 623 651 IPR000048 GO:0005515
Vivi4g05347 1383 PRINTS Myosin heavy chain signature 13 38 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi4g05347 1383 PRINTS Myosin heavy chain signature 60 87 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi4g05347 1383 PRINTS Myosin heavy chain signature 292 320 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi4g05347 1383 PRINTS Myosin heavy chain signature 345 373 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi4g05347 1383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 645 IPR027417 -
Vivi4g05347 1383 FunFam Myosin heavy chain 116 170 - -
Vivi4g05347 1383 Gene3D Kinesin motor domain 11 526 IPR036961 -
Vivi4g05347 1383 Pfam DIL domain 1202 1305 IPR002710 -
Vivi4g05347 1383 CDD MYSc_Myo11 11 584 IPR036018 -
Vivi4g05347 1383 CDD MyosinXI_CBD 977 1349 IPR037975 GO:0007015
Vivi4g05347 1383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 687 745 IPR027417 -
Vivi4g05347 1383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 646 694 IPR027417 -
Vivi4g05347 1383 ProSiteProfiles IQ motif profile. 720 747 IPR000048 GO:0005515
Vivi4g05347 1383 Coils Coil 780 807 - -
Vivi4g05347 1383 SMART DIL_2 1201 1308 IPR002710 -
Vivi4g05347 1383 SMART iq_5 598 620 IPR000048 GO:0005515
Vivi4g05347 1383 SMART iq_5 694 716 IPR000048 GO:0005515
Vivi4g05347 1383 SMART iq_5 646 668 IPR000048 GO:0005515
Vivi4g05347 1383 SMART iq_5 621 643 IPR000048 GO:0005515
Vivi4g05347 1383 SMART iq_5 669 691 IPR000048 GO:0005515
Vivi4g05347 1383 SMART iq_5 717 739 IPR000048 GO:0005515
Vivi4g05347 1383 Coils Coil 839 866 - -
Vivi4g05347 1383 Coils Coil 874 915 - -
Vivi4g05347 1383 Gene3D - 698 746 - -
Vivi4g05347 1383 Gene3D - 598 649 - -
Vivi4g05347 1383 Gene3D - 650 697 - -
Vivi4g05347 1383 Pfam Myosin head (motor domain) 12 584 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi4g05347 1383 Coils Coil 815 835 - -
Vivi4g05347 1383 SMART MYSc_2a 4 597 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi4g05347 1383 Pfam IQ calmodulin-binding motif 697 716 IPR000048 GO:0005515
Vivi4g05347 1383 Pfam IQ calmodulin-binding motif 623 640 IPR000048 GO:0005515
Vivi4g05347 1383 Pfam IQ calmodulin-binding motif 648 667 IPR000048 GO:0005515
Vivi4g05347 1383 Pfam IQ calmodulin-binding motif 672 690 IPR000048 GO:0005515
Vivi4g05347 1383 ProSiteProfiles IQ motif profile. 647 673 IPR000048 GO:0005515
Vivi4g05347 1383 Gene3D - 530 597 - -
Vivi4g05347 1383 Gene3D - 302 487 - -
Vivi4g05347 1383 PANTHER MYOSIN 670 1315 - -
Vivi4g05347 1383 ProSiteProfiles IQ motif profile. 695 724 IPR000048 GO:0005515
Vivi4g05347 1383 Gene3D Myosin VI head, motor domain, U50 subdomain 175 465 - -
Vivi4g05347 1383 ProSiteProfiles Myosin motor domain profile. 1 596 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05347 Vivi-Chr4 186729638 186751983 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05347 11 1381 Myosins gene family AT4G33200 71.939 0.0 2010
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05347 K10357 - gmx:100790815 2355.1