Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05341 ATGGTGATGGCTCAGGTAGGTGTCAGAACACGAGCTCGAGCCGCATTAGCCATGGAAGCCACAAGCTCACTTCCACCAACTGCAAAGAGAAGAAAGATCAACAACAGAGCCGAAAATCGTAAATTCTCAACCGTCAAACCGAAGACGGTTACGGTTAGGCCGGTACCGGAGACGGAGAAAAATTCCTCCGATGAAGATTCTCCGGCATCGTGTTGTTCAAGCAATGGATCCGTTGGACTCGATGAAGAAAGGATCAAATCGTTAGATCTGGAGGTGGAGAGCGCGCAAGGTGAAACGTCGACGTGCAATTGCGATGAAGAAATTGAGAGGAGAGAGATGAGTCGTTCAAGCGAGTTTCGAGGAAATTCTCATGAGCTTGAGTCAATGGAGACCAATTCTCACCGTCCGATTTCATCTGCAAAAAATACGCCAACGGATTTCGAGCTTGAAGAATTTTTCGCTGCTGCTGAGAAAGACATTCAGAAAAAGTTTCAACAAAAGTATAATTATGATATTCTGAAGGACGTTCCAATGGAAGGACGCTACGAGTGGGTTCAGTTAAAGCCATGA 570 0.4596 MVMAQVGVRTRARAALAMEATSSLPPTAKRRKINNRAENRKFSTVKPKTVTVRPVPETEKNSSDEDSPASCCSSNGSVGLDEERIKSLDLEVESAQGETSTCNCDEEIERREMSRSSEFRGNSHELESMETNSHRPISSAKNTPTDFELEEFFAAAEKDIQKKFQQKYNYDILKDVPMEGRYEWVQLKP 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05341 189 Pfam Cyclin-dependent kinase inhibitor 144 187 IPR003175 GO:0004861|GO:0005634|GO:0051726
Vivi4g05341 189 Gene3D p27 134 189 IPR044898 -
Vivi4g05341 189 MobiDBLite consensus disorder prediction 22 80 - -
Vivi4g05341 189 PIRSF CKI_KRP_plant 3 189 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vivi4g05341 189 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 5 188 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vivi4g05341 189 MobiDBLite consensus disorder prediction 109 142 - -
Vivi4g05341 189 MobiDBLite consensus disorder prediction 109 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05341 Vivi-Chr4 186644275 186646434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05341 143 189 Core Cell Cycle Gene Families AT1G49620 61.702 4.84e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05341 - - tpra:123908811 223.016