Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05321 ATGGGTTACTATTATTATAATTATTCCATATTGTGTGTTGTTTTGTTTTTATCCATTCAAATTTCTTTGGCTTCTTCAACTGAAGATCAAAAGAGAGATAAGATAAGTTGGTTGCCAGGGCAACCAAAGAATGTTGGATTTGATCAGTATTCAGGTTATGTAACTGTGAATGAACCGAATGGAAGAGCACTTTTTTACTGGTTGACTGAAGCACCACAGAGTAGTGAACCCGAATCAAAGCCACTACTTCTATGGCTTAGCAATGGTCCTGGTTGTTCCGCTATTTCTTATGGTGCTGCTGAAGAAATTGGCCCTTTTCATATTAAGCCTGATGGCAAAACACTTTACTCAAATCCTTATGCTTGGAACAAACTGGCAAATATATTGTTCCTTGAGTCTCCTGCTGGTGTTGGTTTTTCTTATTCTAATAAAACATCAGATCTGTACACATTTGGTGACAAGAAAAACGCTGAGGATTCATATATTTTTCTTGTTAATTGGTTGGAAAGATTTCCTCAGTATAAGCATAGAGAACTCTACATTGGTGGGATAAGTTATGCAGGTTATTATGTTCCTCAATTGGCTCAAATTGTTTACGAGAGAAACAAAGGAATCAATAATCCAGTTATCAATCTTAAGGGATTCTTGGTTGGAAATGGTGTTATTGATGATTACCATGATTTAGTCGGAACATTTGAGTACTGGTGGACACATGGTTTGATTTCAGATTCTACGTATAAACTTCTAGGAACTGCGTGTGACTCTGGATCTTCTTTGCATCCATCAGCGCAATGTACTCAGGCTCGTAAAGTTGCAACTGCTGAGCAAGGAAACATCGATCTATATAGCATTTATTTTCCGCTTTGTAACAATACATCATCACCATGGATGTCTAGAGTAGATGATCCATGTTTCCAAACGTATTCTGATTTGTATTTCAACCGTCCGGAAGTTCAGAAGGCACTCCATGCCAATGTAACAGGGATTCCATATACATGGAAGGGATGCAGTGATATTGTTGGGAATAATTGGGGTGATTCGGCGTTGTCTGTGCTTCCTATATATCGTGAACTTATCAATGCTAGTCTAAGGATATGGGTATTCAGTGGAGACGCTGATGCTATAGTTCCACTAACCGCCACTCGACGTTCTATTAATGCATTGAAGCTTCCAACCATCGTCAATTGGTATCCTTGGTATGACAGTGGCACGGTTGCTGGATGGAGTCAAGTTTATAAAGGGCTAACATTGGTGACAGTAAGAGGAGCTGGACATAAGGTTGCTTTTCATAAGCCTCGCGAGGCGTTTACTCTTTTTAGATCATATTTGGAGAACAAGAACATGCCATCCTCAAGTTGA 1359 0.3915 MGYYYYNYSILCVVLFLSIQISLASSTEDQKRDKISWLPGQPKNVGFDQYSGYVTVNEPNGRALFYWLTEAPQSSEPESKPLLLWLSNGPGCSAISYGAAEEIGPFHIKPDGKTLYSNPYAWNKLANILFLESPAGVGFSYSNKTSDLYTFGDKKNAEDSYIFLVNWLERFPQYKHRELYIGGISYAGYYVPQLAQIVYERNKGINNPVINLKGFLVGNGVIDDYHDLVGTFEYWWTHGLISDSTYKLLGTACDSGSSLHPSAQCTQARKVATAEQGNIDLYSIYFPLCNNTSSPWMSRVDDPCFQTYSDLYFNRPEVQKALHANVTGIPYTWKGCSDIVGNNWGDSALSVLPIYRELINASLRIWVFSGDADAIVPLTATRRSINALKLPTIVNWYPWYDSGTVAGWSQVYKGLTLVTVRGAGHKVAFHKPREAFTLFRSYLENKNMPSSS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05321 452 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Vivi4g05321 452 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 432 IPR001563 GO:0004185|GO:0006508
Vivi4g05321 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Vivi4g05321 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 415 428 IPR001563 GO:0004185|GO:0006508
Vivi4g05321 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Vivi4g05321 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Vivi4g05321 452 FunFam Carboxypeptidase 351 445 - -
Vivi4g05321 452 FunFam Carboxypeptidase 29 291 - -
Vivi4g05321 452 Pfam Serine carboxypeptidase 39 445 IPR001563 GO:0004185|GO:0006508
Vivi4g05321 452 Gene3D - 351 444 - -
Vivi4g05321 452 SUPERFAMILY alpha/beta-Hydrolases 31 448 IPR029058 -
Vivi4g05321 452 Gene3D - 304 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05321 Vivi-Chr4 186304760 186307317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05321 314 446 Calmodulin-binding Proteins AT2G22960 29.851 1.39e-12 64.3