Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05301 ATGATGCACATGACTCTGTACTGGGGGAAAAACGTGACACTTCTATTCGATTCGTGGAAGACCGATTCATGGACGAGTTATCTAGTGAGTTTGTTCGCGTGTTTTTTGATTGCTTCTTTCTATCAGTATCTGGAGAATATTCGGATTCGGTTGAAGTTTTTCTCCGGTGGGAAGGGGGAATCTCCGGTGCCGGAGAATCAGGCTCCTCTTCTGGGGTTGAATAAGGTTTCTAGAAATAAGGTTGCGGAATCGGTTTTGTTTGGTGTGAATTCTGCGATTGGGTATTTGTTGATGTTGGCTATAATGTCGTTTAATGGAGGGGTTTTTGTGGCTATTGTTGTTGGTTTAACGATTGGTTACTTCTTGTTTAGGATTCAGGGTGAAGAAGATGCTTCTCTTGTAGTTGATAATTCTTGTGCATGTGCTTAG 429 0.4219 MMHMTLYWGKNVTLLFDSWKTDSWTSYLVSLFACFLIASFYQYLENIRIRLKFFSGGKGESPVPENQAPLLGLNKVSRNKVAESVLFGVNSAIGYLLMLAIMSFNGGVFVAIVVGLTIGYFLFRIQGEEDASLVVDNSCACA 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05301 142 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 126 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vivi4g05301 142 Pfam Ctr copper transporter family 4 51 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vivi4g05301 142 Pfam Ctr copper transporter family 79 123 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05301 Vivi-Chr4 186104800 186105574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05301 1 142 Inorganic Solute Cotransporters AT5G20650 55.102 4.21e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05301 K14686 - gmx:100795071 202.216