Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05272 ATGCATTTCTCTTCTCCTCTCTCCCTCAGTCAGGTTCATGCTGCTGATGATTCTCCTGTTAGTGGTGGAGGGCTCAGTCAGAATGGAAAGTTCAGCTATGGATATGCTAGCTCTCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGCGTTGATGGCGAAGTTGTTGGTCTTTTTGGAGTTTTTGATGGTCACGGCGGCGCTCGTGCTGCAGAATATGTCAAGCAAAACCTATTTAGCAATTTGATCAGCCACCCAAAATTCATTTCCGACACCAAATCTGCAATAGCTGATGCATATACGCACACCGACTCTGAATTTCTTAAATCAGAAAATAACCAAAACAGAGATGCTGGATCTACTGCTTCTACTGCCATTCTTGTTGGTGATCGCTTGCTTGTTGCCAATGTCGGGGACTCTAGAGCTGTTATTTGCAGGGGTGGAAATGCAATTGCTGTGTCCCGAGATCACAAACCAGATCAAACCGATGAGAGGCAAAGGATAGAAGATGCAGGCGGTTTCGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGCGCATTTGGCGATAGACTCCTTAAACAATACGTTGTTGCTGATCCTGAAATTCAGGAAGAAAAAGTTGATAGCTCTCTTGAGTTTCTTATACTGGCTAGTGACGGGCTATGGGATGTTGTCTCTAACGAGGAAGCTGTTGCTATGATTAAACCAATCGAGGATGCAGAGGTAGCAGCAAAGAGGCTGATGAAAGAAGCGTATCAGAGAGGTAGTTCTGACAACATTACTTGTGTCGTCGTTCGTTTCCTAACGAACAACCAAGGTTCTTCGTCTCGTAATAGCTCTGGCTAA 879 0.4482 MHFSSPLSLSQVHAADDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYTHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEVAAKRLMKEAYQRGSSDNITCVVVRFLTNNQGSSSRNSSG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05272 292 SMART PP2C_4 22 276 IPR001932 -
Vivi4g05272 292 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Vivi4g05272 292 PANTHER PROTEIN PHOSPHATASE 30 277 IPR015655 GO:0004722|GO:0006470
Vivi4g05272 292 SUPERFAMILY PP2C-like 26 278 IPR036457 -
Vivi4g05272 292 CDD PP2Cc 31 278 IPR001932 -
Vivi4g05272 292 Gene3D - 24 285 IPR036457 -
Vivi4g05272 292 ProSiteProfiles PPM-type phosphatase domain profile. 32 278 IPR001932 -
Vivi4g05272 292 FunFam probable protein phosphatase 2C 59 24 282 - -
Vivi4g05272 292 Pfam Protein phosphatase 2C 60 271 IPR001932 -
Vivi4g05272 292 SMART PP2C_SIG_2 27 278 IPR001932 -
Vivi4g05272 292 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05272 Vivi-Chr4 185147482 185151613 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05272 8 289 PP2C-type Phosphatase Gene Family AT4G31750 89.825 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05272 K17506 - gmx:100795017 525.783