Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05271 ATGATAATTTGGAACCTTTTTCACGCAAGAATAAGCTCTACGCACGCAATATTGCAATTGTTTCTTCTTCATTTTTTCGTTTTTTTGGTTAAACAAGCTGTATCTGAGAACCTTGAATATTCAACCTGTGATATGGGCTACCTCAATTCTGTTTTGTCTTCTTCAAGTCAGGTTCATGCTGCTGATGATTCTCCTGTTAGTGGTGGAGGGCTCAGTCAGAATGGAAAGTTCAGCTATGGATATGCTAGCTCTCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGCGTTGATGGCGAAGTTGTTGGTCTTTTTGGAGTTTTTGATGGTCACGGCGGCGCTCGTGCTGCAGAATATGTCAAGCAAAACCTATTTAGCAATTTGATCAGCCACCCAAAATTCATTTCCGACACCAAATCTGCAATAGCTGATGCATATACGCACACCGACTCTGAATTTCTTAAATCAGAAAATAACCAAAACAGAGATGCTGGATCTACTGCTTCTACTGCCATTCTTGTTGGTGATCGCTTGCTTGTTGCCAATGTCGGGGACTCTAGAGCTGTTATTTGCAGGGGTGGAAATGCAATTGCTGTGTCCCGAGATCACAAACCAGATCAAACCGATGAGAGGCAAAGGATAGAAGATGCAGGCGGTTTCGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGCGCATTTGGCGATAGACTCCTTAAACAATACGTTGTTGCTGATCCTGAAATTCAGGAAGAAAAAGTTGATAGCTCTCTTGAGTTTCTTATACTGGCTAGTGACGGGCTATGGGATGTTGTCTCTAACGAGGAAGCTGTTGCTATGATTAAACCAATCGAGGATGCAGAGGTAGCAGCAAAGAGGCTGATGAAAGAAGCGTATCAGAGAGGTAGTTCTGACAACATTACTTGTGTCGTCGTTCGTTTCCTAACGAACAACCAAGGTTCTTCGTCTCGTAATAGCTCTGGCTAA 1017 0.4307 MIIWNLFHARISSTHAILQLFLLHFFVFLVKQAVSENLEYSTCDMGYLNSVLSSSSQVHAADDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYTHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEVAAKRLMKEAYQRGSSDNITCVVVRFLTNNQGSSSRNSSG 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05271 338 SMART PP2C_SIG_2 73 324 IPR001932 -
Vivi4g05271 338 Pfam Protein phosphatase 2C 106 317 IPR001932 -
Vivi4g05271 338 CDD PP2Cc 77 324 IPR001932 -
Vivi4g05271 338 ProSiteProfiles PPM-type phosphatase domain profile. 78 324 IPR001932 -
Vivi4g05271 338 SMART PP2C_4 68 322 IPR001932 -
Vivi4g05271 338 ProSitePatterns PPM-type phosphatase domain signature. 109 117 IPR000222 GO:0043169
Vivi4g05271 338 PANTHER PROTEIN PHOSPHATASE 64 323 IPR015655 GO:0004722|GO:0006470
Vivi4g05271 338 Gene3D - 70 331 IPR036457 -
Vivi4g05271 338 FunFam probable protein phosphatase 2C 59 70 328 - -
Vivi4g05271 338 SUPERFAMILY PP2C-like 72 324 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05271 Vivi-Chr4 185147451 185151613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05271 45 335 PP2C-type Phosphatase Gene Family AT4G31750 90.476 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05271 K17506 - gmx:547661 592.808