Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05234 ATGGCTGTTTCATCTTCTTCTTCTCTTTTGCTCATGTTTCTTGTCTTTGCTTTTGCTGCTGCAGCACCCAAGGATTACTTAATTGGTGGCAAACCTGATGCATGGAAGGTTCCATCTTCTGAATCTGACTCTCTCAACAAATGGGCACAAAGTGTTCGTTTCCGCATTGCAGACCATCTTATTTTCAACTATGAAACTGGAAAAGACTCTGTTTTGCAAGTGAGCAAAGAGGATTACACAAGCTGCAACATCTCAAACCCAATCAAAAAGTACAATGATGGGAAAACCAAGGTGAGATTTGATCATTCTGGTTCATACTACTACATCAGTGGAGAAAAGGGTCACTGTGAAAAGGGACAGAAGGTTATTGTGTCTGTTATAAGCCCAAGAAGTCCAAGTGTTGGTCCTGTTTCACCTGCATCTGCACCTTCACCAGGTGGTGGTGTTGAAGGTCCAGCTGTTGCTCCAAGTCCAACTAGTGGTGGAAGTGTTTTGCAAGGTGGTGGTGTTTTGATGGCTGTGGGAGTGGTGGCTGCTATGTGGGTTTTCTGA 552 0.4402 MAVSSSSSLLLMFLVFAFAAAAPKDYLIGGKPDAWKVPSSESDSLNKWAQSVRFRIADHLIFNYETGKDSVLQVSKEDYTSCNISNPIKKYNDGKTKVRFDHSGSYYYISGEKGHCEKGQKVIVSVISPRSPSVGPVSPASAPSPGGGVEGPAVAPSPTSGGSVLQGGGVLMAVGVVAAMWVF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05234 183 CDD OsENODL1_like 24 127 IPR041846 -
Vivi4g05234 183 FunFam Early nodulin-like protein 1 23 131 - -
Vivi4g05234 183 SUPERFAMILY Cupredoxins 24 127 IPR008972 -
Vivi4g05234 183 ProSiteProfiles Phytocyanin domain profile. 24 128 IPR003245 GO:0009055
Vivi4g05234 183 MobiDBLite consensus disorder prediction 131 160 - -
Vivi4g05234 183 Pfam Plastocyanin-like domain 35 120 IPR003245 GO:0009055
Vivi4g05234 183 PANTHER BLUE COPPER PROTEIN 25 136 IPR039391 GO:0009055
Vivi4g05234 183 Gene3D - 23 131 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05234 Vivi-Chr4 184496551 184497506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05234 14 180 Phytocyanin Superfamily AT2G25060 49.102 7.56e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05234 - - gmx:100305551 165.622