Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05223 ATGGCTTTGTTTCGGAAGTTCTTTTATAAGAAACCCCCTGATGGCCTTCTTGAAATCACTGAAAGGGTTTATGTGTTTGATTACTGTTTTACGACGGAGGTTATGGACGAAAGCGAATACAAAGGGTATATAGGAGGAATAATTAGGCAAATTGGCGAGCATTTCCCCGATGCTTCGTTTATGGTGTTCAACATGAGGGAAGGAGAGCACCAAAGCCATATATCGAACATTTTGTGCGACTATGACATGACTGTGATGGACTATCCTAGACAGTATGAAGGTTGTCCGTTACTTACGATGGAAATGATTCATCATTTCTTGAGATCGGGTGAAAATTGGCTTCAACTCGGACAACAGAATATCGTCTTGATGCATTGCGAGCGAGGTGGGTGGCCGGTTTTAGCGTTTATGCTGGCTTCACTATTGATTTATAGGAAAATGTTTACGGGGGAACAGAAAACATTGGATATGATATATAAGCAAGCGCCTCGGGAACTTTTGCAGTTGATGTCACCGTTGAATCCTTTACCTTCGCAGTTAAGGTATCTTCAATATATATCAAGAAGAAATGTTGGTTCCGAATGGCCTCCTTTGGATAGGGCGCTTACGTTGGATTGCGTAATTATAAGACAGATTCCTAATATGGATGGAGACGGTGGTTGCCGTCCTATATTTAGGATATACGGACAGGACCCTTTTATTCCCGCTGATCGGACTCCAAAAGTTCTCTTCTCTACTCCAAAAAAGAGCAAACTTGTTCGGTACTTTAAACAGGCTGATTGTGAACTTGTGAAGATTGACATCCATTGTCATGTTCAAGGCGATGTTGTACTTGAGTGTATTAGTTTAGAAAGTGATTTGGAACGTGAACAAATGATGTTCCGTGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTCAACCGCGATGAAATCGACATGTTATGGAATGCTAAAGATCACTTTCCTAAAAATTTTAGAGTAGAGGTTCTTTTCTCAGATATGGATACTTCTTCGTCTTCTGATATTTCACTCGATCTTCCTCCTCCTCGTACGGAGGAGAAAGAAGGTCTACCTGTTGAAGCATTCGATAAAGTTAAGGAAATTTTCAGCAACGTTGATTGGCTCGATCCGAAGACAGATGTAGCAAATATGCTCCAACAGATCACGTCATCGAATATCCTTCTAGAAAGATTGGACAGCGGAGCTTCTTCTGGTTCACCAAACACCGTGCTAAACGAGTCATTCTCCGGAAGATTAAAATTTGATTCCAAGACACAAAAGGAAACGAGCAATCTGAAATCTTCCGATCACGAGGAACTTCCGGACTCTCCATTGCAGTCATCTGAAGATGCTACCAAGGAAAAAATGCTTGAACCGAAATTGGCATCAAAAGAGAAAATCAAGACTCCTGCGAGTTTAGGTCAAGCGGTCAAGCCTATTCCTTCATTTGATCCGTCAAAAGATTCAGATTCTACTAAAATAGAAACTAAATCATCAGAATCAAAACAATCATCGGAAAAGAAAGGATCGTTGGAATCTGAGAAAAAAAATATTGTCTCGTTAGCATCAAAGGAGGCGGTATTGAAAAAAGACACCGTGTTTCCTGCATCGGAATCTTCTACTGTTGCAACCCCGGTGAAAAATATTAGACTGTCGGGATCGAAAGAAAAGGAGGTTGAATCATTAGACTCAGAGGTTCGGTTGAAAAATGATAGCAGACCTAAGTTTGATCCAAAGACTCAGCCAGAAGTTGAGATAACAAGTCTGAAATCTGCAGGTCAAGAGAAATTTTCAGTACCGTCGTTAGAATCATTCGGTGATGCTACCTTGGGAAAGAAGAAAGAACCCTTAGATTTAATTGATCAGGGGAAACAACATATTCACTCAGTTGGACTCCCATCAGATTCAAATCTTACTGAAAAGAAGATTGAATCGTTAAAATCAAAGGCCCCGGTGGATAATCTTACTAAGCTTCCTATGTCTACGGCTCAAGGGAAACAATATATTCCGTCAGCTGCTCCATCCTCGGAAGCGAATTCATTGGAACAGACGGTGGAGAAATCGAAGTCAAAGAAAAAGGATACCGAATCATTAGAATCGAATGATACTAAGTTTCCTATGTCTACGGCTCAAGGGAAACAATCTACTTCCTTGATTGCACCATCCACGGAAAAAGATTCAACGGAACAGACGGTGGAGAAATTGAAGTCGAAGAAAAAGGACACTGAATCATTAGAATCAAAGTCATTGTTGGAAAATGATACCAAGTTTCCTATCTCTATGGCTCAAGGGAAACAACAATCTATTCCCTCGATTAAACCATCCGTTGAAGCAGATTCAACGAAACAGACGACGGAGAAGTTAAAGTCAAAGAAAAAGGATACTGAATCATTAGAATCAAAGTCATTGTTGGAAAATGATACCAAGTTTCCTACATCTATGGCTCAAGGGAAACAACAGTCTATTCCCTCGATTAAGCCATCCGTGGAAGCAGATTCAACGGAACAGACGATGGAGAAGTTAAAGGCAAAGAAAAAGGATACCACATCATTAGAATCAAAATCATTGTTGGAAAATGATACCAAGTTACCGACGTCTATGGCTCAAGGGAAACAACAATCTATTCCCTCGATTGAACCATCCGCGGAAGCAGATTCAACGAAACAGACGATGGAGAAGTTAAAGTCAAACAAAAAGGATACTGAATCATTAGAATCAAAGTCATTTTTGCAAAATGATACCAAGAGGGAACAATCAGTTCCTCCTGTAATTCAAACGTCGATGGATTCAAGTTCAAAGAAAACAATGATTGAAAAATCAGAATCCCCAGCATTGTCGAAAAATGATATTAAGAGTCATGTATCGATGGTTGATAAGAAACAAACTAGTCCCTTCGTTGAACCCGGCGTTGATGCAAAATCAATTAAAAAGAAGATTGATCCTCAAGAATTGCAGGTTTCTCTTCAGCTACCTACGCAATCTAAAATAATTTCTCCAAGGATGCATCAAGCTATTCGACCGGCTTCAGCTTCAGCTTCTTATGCTTCTAACCCCTTACTAGGTTCACCTGTAGCCATCTCAAGATATCACAGTGCACCATCGGCTCTCGGAATAACAAGCGTGTTACAAGATCATACACTGATGGATAGCAAAGAAGAACCCACTCATGCAGTGTCGATATCCGCTCCTTCAGATTCAAAGGTTCCAAAATCTGCAGAGCCTTGTTCTACAAGTATTCCTACAACATCATCATCGTCGGCATTGCTTCCATCTTTGCCTTTAAAGTCTTCAGTGGATCCTCCTGCTTCTGTCGAAAAGACTATTAAGCCACTCGTCCCTATTCCTCCTCCTCCACCTCCGCCGCCACCTCCTCATCAAGAACTTACTTCAAATTTGACGCAATCTACTATTCCTGTCACACAATACAGTGAAAATTCAATGCACGATAAAAACCGGATATCATTGGCTCCTCCTCCTTCTCCCCCTTCTTCGTCCCTCATTGAAACATCTCTTTCCACTGTCAAAGATTCATCTAAAGGTCCTCCCCCCCCACCTCCACCACCACTTCCATCTTCAACTGTACAAACTTCATCGTCGTCAATACCTCCACCTCCCGTTCCTCCTCCACAAAATACAAACAATTCCATTTCTATGCCCGGCCCTCCTCCTCCACCTCCACCTCCAAGTCAATCTGGCTCGGCACCATTAGCGCCACCACCACCTCCTCCTCCTATTTCTGCATCCCAAAATTCTAAAAGCGCTCCAAATGTTCCACCTCCACCTCCTTCTGCCAATGGATTATCAAAACCTGGCACTGCCTCATCGCAGTCTCCAGCAGTTCCTAGACCACCGGGAAATGCACCTCCGGCTCCTGGACCTCCTGGAAACGTGCCTCCAATTCCTGGACCACCTTCCGGTGCATTTGGTGCAAAGGGACGTGGAATGTTGCGAGCTAATGCAAAAACTCAGACTAAAAGAAGCAACCTGAAACCTTACCATTGGTTAAAGTTAACAAGAGCCATGCATGGTAGCTTGTGGGCCGAGACACAGAAACTCGATGAAGCTTGTAGGGCTCCAGAGTTTGACATGACAGAGCTTGAGAGTCTTTTTTCAGCAGCCACTCCGAATACTAATAATGAAAAAGGAGGAAAATCAAATCGCCGTTCAGCGCAAAAACCCGACAAAGTTCAAATAATTGAACTCAGACGGGCGTATAACTGTGAGATTATGCTTACAAAAGTCAAAATCCCATTGCCTGATTTAATGAGTAATGTTCTCGCATTGGACGATTCCGTATTATATGTTGATCAGGTTGAGAACCTTATAAAGTTCTGTCCGACTAAAGAAGAGATGGACCAGCTCAAGGCCTACACTGGAGATACGGAAAACTTGGGGAAGTGTGAAAAGTTCTTTTTAGAACTAATGAAAGTTCCAAGAGTGGAGAGCAAGCTAAGAGTTTTCTGTTTTAAGATGCAATTCTGCTCGCAGGTTTCAGACCTCAAAAGGGACTTGAATATTGTAAATTCCGCATCGGAACAGATAAGAAATTCCGTCAAATTGAAAAGAATCATGCAGACCATTCTTTCCCTCGGTAATGCTTTGAACCATGGAACCGCAAGAGGTGCTGCGGTTGGGTTTCGATTAGATAGTCTTCTTAAACTCACTGATACACGAGCCCGAAACAACAAAATGACCCTCATGCATTATCTTTGTAAGGTGCTAGCTGAAAAGCTTCCGGAACTTTTGGATTTCCATAAAGACCTAGTCAGTTTGGAGGCTTCAACCAAGCTACAATTGAAATATCTGGCAGAAGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAATTCAAGAACTGTCTGCATCGGAAAACGACGGGCCAGTGTCAGAATGCTTCTGCCAGATTCTGAAAGAATTTCTTAGTCATGCCGAAGCTGAAGTGAGGTCTTTGGCTCAGCTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCGCTATATTTCGGAGAAGACCCGGCACGTTGCCCGTTCGAACAAGTTGTATCTACACTGCTGAACTTTGTGAGGATGTTCATCCGAGCACACGACGAAAATTGCAAGCAAATTGAATACGAAAAGAAGAAAGCTGATAAGGAAGCTGCAGAAAACGAGAAATTGAAGGTAGCTGCGAGAAACGAGTCCAAACCTATGATGAGGACCACCATCAAGAGTGGTGATGTTAAATAA 5241 0.42 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTEVMDESEYKGYIGGIIRQIGEHFPDASFMVFNMREGEHQSHISNILCDYDMTVMDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNIVLMHCERGGWPVLAFMLASLLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRQIPNMDGDGGCRPIFRIYGQDPFIPADRTPKVLFSTPKKSKLVRYFKQADCELVKIDIHCHVQGDVVLECISLESDLEREQMMFRVMFNTAFIRSNILMLNRDEIDMLWNAKDHFPKNFRVEVLFSDMDTSSSSDISLDLPPPRTEEKEGLPVEAFDKVKEIFSNVDWLDPKTDVANMLQQITSSNILLERLDSGASSGSPNTVLNESFSGRLKFDSKTQKETSNLKSSDHEELPDSPLQSSEDATKEKMLEPKLASKEKIKTPASLGQAVKPIPSFDPSKDSDSTKIETKSSESKQSSEKKGSLESEKKNIVSLASKEAVLKKDTVFPASESSTVATPVKNIRLSGSKEKEVESLDSEVRLKNDSRPKFDPKTQPEVEITSLKSAGQEKFSVPSLESFGDATLGKKKEPLDLIDQGKQHIHSVGLPSDSNLTEKKIESLKSKAPVDNLTKLPMSTAQGKQYIPSAAPSSEANSLEQTVEKSKSKKKDTESLESNDTKFPMSTAQGKQSTSLIAPSTEKDSTEQTVEKLKSKKKDTESLESKSLLENDTKFPISMAQGKQQSIPSIKPSVEADSTKQTTEKLKSKKKDTESLESKSLLENDTKFPTSMAQGKQQSIPSIKPSVEADSTEQTMEKLKAKKKDTTSLESKSLLENDTKLPTSMAQGKQQSIPSIEPSAEADSTKQTMEKLKSNKKDTESLESKSFLQNDTKREQSVPPVIQTSMDSSSKKTMIEKSESPALSKNDIKSHVSMVDKKQTSPFVEPGVDAKSIKKKIDPQELQVSLQLPTQSKIISPRMHQAIRPASASASYASNPLLGSPVAISRYHSAPSALGITSVLQDHTLMDSKEEPTHAVSISAPSDSKVPKSAEPCSTSIPTTSSSSALLPSLPLKSSVDPPASVEKTIKPLVPIPPPPPPPPPPHQELTSNLTQSTIPVTQYSENSMHDKNRISLAPPPSPPSSSLIETSLSTVKDSSKGPPPPPPPPLPSSTVQTSSSSIPPPPVPPPQNTNNSISMPGPPPPPPPPSQSGSAPLAPPPPPPPISASQNSKSAPNVPPPPPSANGLSKPGTASSQSPAVPRPPGNAPPAPGPPGNVPPIPGPPSGAFGAKGRGMLRANAKTQTKRSNLKPYHWLKLTRAMHGSLWAETQKLDEACRAPEFDMTELESLFSAATPNTNNEKGGKSNRRSAQKPDKVQIIELRRAYNCEIMLTKVKIPLPDLMSNVLALDDSVLYVDQVENLIKFCPTKEEMDQLKAYTGDTENLGKCEKFFLELMKVPRVESKLRVFCFKMQFCSQVSDLKRDLNIVNSASEQIRNSVKLKRIMQTILSLGNALNHGTARGAAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFHKDLVSLEASTKLQLKYLAEEMQAISKGLEKVIQELSASENDGPVSECFCQILKEFLSHAEAEVRSLAQLYANVGRNADALALYFGEDPARCPFEQVVSTLLNFVRMFIRAHDENCKQIEYEKKKADKEAAENEKLKVAARNESKPMMRTTIKSGDVK 1746
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 1054 1316 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 629 973 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 784 807 - -
Vivi4g05223 1746 SMART it6_source 1183 1744 IPR015425 -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 341 361 - -
Vivi4g05223 1746 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1243 1715 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 425 526 - -
Vivi4g05223 1746 Coils Coil 729 749 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 659 687 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 492 518 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 808 836 - -
Vivi4g05223 1746 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1323 1722 IPR015425 -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 556 587 - -
Vivi4g05223 1746 Coils Coil 1746 1746 - -
Vivi4g05223 1746 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Vivi4g05223 1746 Coils Coil 835 855 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 705 730 - -
Vivi4g05223 1746 PANTHER FORMIN-J 1 574 - -
Vivi4g05223 1746 SMART PTEN_C2_2 197 337 IPR014020 -
Vivi4g05223 1746 Gene3D - 196 341 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 556 584 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 688 704 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 1061 1096 - -
Vivi4g05223 1746 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 1204 1270 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 1285 1309 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 858 889 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 890 916 - -
Vivi4g05223 1746 Coils Coil 1697 1731 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 1132 1154 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 1374 1397 - -
Vivi4g05223 1746 Coils Coil 888 908 - -
Vivi4g05223 1746 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Vivi4g05223 1746 Pfam Formin Homology 2 Domain 1325 1696 IPR015425 -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 425 469 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 1114 1131 - -
Vivi4g05223 1746 Coils Coil 682 702 - -
Vivi4g05223 1746 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 837 857 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 917 946 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 1374 1388 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 755 783 - -
Vivi4g05223 1746 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Vivi4g05223 1746 Gene3D Formin, FH2 domain 1342 1735 IPR042201 -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 731 754 - -
Vivi4g05223 1746 MobiDBLite consensus disorder prediction 1182 1196 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi4g05223 Vivi-Chr4 184322807 184330721 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05223 1 406 FH2 protein (formin) Gene Family AT2G25050 69.287 0.0 635