Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05215 ATGGGGGAGGAAGTGAAACAAAACATGCTATTTGGAAAGTACGAGGTAGGAAGAGTACTAGGTAAAGGAACATTTGCAAAGGTTTACTATGCTAAAGAAATTTCAACAGGTGAAGGAGTAGCTATTAAGGTTATAGAGAAAGAAAAAGTGAGAAAAGAAGGAATGATGGAACAAATAAAACGTGAAATCTCCGTCATGAGTAGTTTAGTAAAACATCCAAACATCGTCAACCTCAAAGAAGTCATGGCAACAAAAACCAAGATCTTGTTCGTCATGGAATATGCTCGAGGTGGCGAGTTATTCGACAAGCTCGCCAAAGGAAAATTCAAAGAAGAAACCGCGAGAAAATACTTTCAACAACTTATCAGCGCGGTTGATTATTGTCACAGTCGCGGTGTATCTCACCGCGACTTAAAACCAGAGAACCTTTTACTCGACGAAAACGAGAATCTTAAGGTCTCTGATTTTGGTCTCTCGGCGTTGCCTGAACAGCTACGCCAAGACGGACTTTTACACACTCAATGTGGGACTCCGGCGTACGTGGCGCCGGAGGTTGTTAGAAAAAAAGGTTATAACGGTTTTAAGGCGGATACTTGGTCATGCGGTGTTATATTATATACTTTACTTGCTGGATTTTTACCTTTTCAACATGAGAATTTGATTTCCATGTATAATAAGGTTTTCAAAGAAGAGTATCAATTTCCACCATGGTTTTCTTCGGATTCGAAGAGGCTAATCTCGAAGATTCTCGTGGCGAATCCTGAACGAAGAATTAATATTCCTTCGATCATGAATTCGCCATGGTTTCGAAGAGGTTTGAGTTTCAATACTAATTCAAATGATGATTTGGATTTGGAAATAGAAGCAAAGGCTAATTTGATTGATTCTTCTTCACCTGAATTCTTCAATGCTTTCGAGTTTATTTCAACTATGTCTTCGGGTTTTGATCTTTCGGGTTTGTTTGAGGAAAAGAAAAAAAGAGGTTCGGTTTTTACTTCAAAGTGTTCGGTTTCAGAGATAGTGACAAAAATTGAAACCGCTGCGAAAAGTTTAAGGTTTAAGGTTAAGAAAATGAAGGAGTTTAAACTTAGGTTACTAGGGAATGTTGAAGGGAGGAAAGGAAAGTTGGCCGTTACGGCGGAGATATATGAGGTGGCGCCGGAGCTTGCGGTGGTTGAATTTTCGAAAAGTTCCGGTGATACTTTTGAGTATGTGAAGTTGTTTGAAGATGAAGTTAGGCCAGCACTAAAGGACATTGTTTGGTCGTGGCAAGGGGAGTGA 1281 0.3973 MGEEVKQNMLFGKYEVGRVLGKGTFAKVYYAKEISTGEGVAIKVIEKEKVRKEGMMEQIKREISVMSSLVKHPNIVNLKEVMATKTKILFVMEYARGGELFDKLAKGKFKEETARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDENENLKVSDFGLSALPEQLRQDGLLHTQCGTPAYVAPEVVRKKGYNGFKADTWSCGVILYTLLAGFLPFQHENLISMYNKVFKEEYQFPPWFSSDSKRLISKILVANPERRINIPSIMNSPWFRRGLSFNTNSNDDLDLEIEAKANLIDSSSPEFFNAFEFISTMSSGFDLSGLFEEKKKRGSVFTSKCSVSEIVTKIETAAKSLRFKVKKMKEFKLRLLGNVEGRKGKLAVTAEIYEVAPELAVVEFSKSSGDTFEYVKLFEDEVRPALKDIVWSWQGE 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05215 426 Gene3D Kinase associated domain 1, KA1 296 422 - -
Vivi4g05215 426 ProSiteProfiles Protein kinase domain profile. 14 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05215 426 FunFam Non-specific serine/threonine protein kinase 5 94 - -
Vivi4g05215 426 SUPERFAMILY Protein kinase-like (PK-like) 10 295 IPR011009 -
Vivi4g05215 426 FunFam Non-specific serine/threonine protein kinase 7 304 - -
Vivi4g05215 426 Pfam NAF domain 299 357 IPR004041 GO:0007165
Vivi4g05215 426 Coils Coil 42 62 - -
Vivi4g05215 426 Gene3D Transferase(Phosphotransferase) domain 1 95 273 - -
Vivi4g05215 426 FunFam Non-specific serine/threonine protein kinase 297 421 - -
Vivi4g05215 426 Pfam Protein kinase domain 14 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05215 426 CDD CIPK_C 303 417 - -
Vivi4g05215 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Vivi4g05215 426 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 417 - -
Vivi4g05215 426 ProSiteProfiles NAF domain profile. 297 322 IPR018451 GO:0007165
Vivi4g05215 426 SMART serkin_6 14 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05215 426 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Vivi4g05215 426 Gene3D Phosphorylase Kinase; domain 1 3 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05215 Vivi-Chr4 184197088 184198961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05215 1 426 CBL-interacting serine-threonine protein kinases AT5G25110 65.837 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vivi4g05215 Pkinase 2.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05215 - - tcc:18587713 603.979