Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05188 ATGGCAAATCCAAACTTGATTACTTTAAAATTTTCAATATTGCTAACCATTATACTTGTGGTTAATGCTACTGATAAAGGTTTCAATCCTAAGGTACCTGTTATAATTCAGAATGATATAACACCACATCCAACTCCCTTAAATCTCACTGTTCATTGCAAATCCAAAGATGATGATCTTGGATTTCACACACTCGTATTCGGACAAAAGTACATATTTTCATTTAGGCCAAAATCTAATATGAGTCGACGGATTGATTCTATTAAGGAGATTAATGACAACAAGGAGACATGGAGACTGGCTGTTCGAGTTCTTGATGTTTGGATCATTGTTAACAATAAGGATTTAGCTAAATTCGACTTGCATGCTCTTGCCTATTATTTGTTGTGTCCTGTTGGAGTGAGAAGGTGGCAATATGTCATTTTTTACCTCTGCCCTGAATAG 444 0.3536 MANPNLITLKFSILLTIILVVNATDKGFNPKVPVIIQNDITPHPTPLNLTVHCKSKDDDLGFHTLVFGQKYIFSFRPKSNMSRRIDSIKEINDNKETWRLAVRVLDVWIIVNNKDLAKFDLHALAYYLLCPVGVRRWQYVIFYLCPE 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05188 147 Pfam Plant self-incompatibility protein S1 34 79 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05188 Vivi-Chr4 183744826 183748691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05188 27 77 Carbohydrate Esterase AT3G16970 46.154 3.87e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05188 - - vvo:131598486 305.834