Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05152 ATGAAATGGTTTCTTTCTATGGAATGTGCACTTTTTCGCTATCGTTTTCGTTTTCTAACTACTGAAGCTCAGAGGGCAATCATGGACGAATTTGACATAACTTACAAGGATGAGATTGCTGCACTGGGAGGGAAAACTGCTACTGGAATTAATGTTTTCAGCGCCTTCGACGATAGACTCAAAGAGATACGAGAGTATAATAGGAAGCATCCGGTTGCACGTGTTGTTGATGCTAATGACGATTCTGAAGCTATTCTTAAAGAGGAACCTCAAATTGAGTTCAGTGGAGAGCTGTCGATGATATTCAATCGAAGTTCTCTTACAATGGGAAGTCCTGACATAAAGCAGTATTTGAATACTCGTGATCCAAGAGGGACAGATTGGCTACAAGCCGAATGTGATGTTTCAATTCGTGGAGGATGGTTTTGGCATAAATCAGAATCACCAAAAAAACTAAGGTTGGAATTGTTTATTATGGTAGACAATCTCCTGGTGGACACAATGTTATTTGGGGTCTTCACTCTGCTCTCAATATTCACAACTCTAAGAGTGTGTTTGGATGAGGTGGTTCAGAAGGTTTATTTGCCCAAAAAACATTGGAGATAA 606 0.3993 MKWFLSMECALFRYRFRFLTTEAQRAIMDEFDITYKDEIAALGGKTATGINVFSAFDDRLKEIREYNRKHPVARVVDANDDSEAILKEEPQIEFSGELSMIFNRSSLTMGSPDIKQYLNTRDPRGTDWLQAECDVSIRGGWFWHKSESPKKLRLELFIMVDNLLVDTMLFGVFTLLSIFTTLRVCLDEVVQKVYLPKKHWR 201
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05152 201 Pfam Splicing factor SF3a60 binding domain 47 71 IPR021966 -
Vivi4g05152 201 Gene3D - 1 66 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi4g05152 Vivi-Chr4 182861784 182867438 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05152 18 97 C2H2 Transcription Factor Family AT5G06160 63.750 1.75e-25 100