Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05138 ATGCCTTCCCACAAGACATTCATCATCAAGAAGAAGCTCGCCAAGAAGCAGAGGCAGAACAGACCCATCCCTTACTGGATCCGCATGAGAACCGACAACACCATCAGGTATAACGCTAAGCGTCGTCACTGGCGTCGTACCAAGCTTGGATTCTAA 156 0.5 MPSHKTFIIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05138 51 Gene3D Ribosomal protein L39e 1 51 IPR023626 -
Vivi4g05138 51 PANTHER RIBOSOMAL PROTEIN L39E 1 51 - -
Vivi4g05138 51 Pfam Ribosomal L39 protein 9 49 IPR000077 GO:0003735|GO:0005840|GO:0006412
Vivi4g05138 51 Hamap 50S ribosomal protein L39e [rpl39e]. 1 51 IPR000077 GO:0003735|GO:0005840|GO:0006412
Vivi4g05138 51 SUPERFAMILY Ribosomal protein L39e 3 50 IPR023626 -
Vivi4g05138 51 FunFam 60S ribosomal protein-like L39 1 51 - -
Vivi4g05138 51 ProSitePatterns Ribosomal protein L39e signature. 30 46 IPR020083 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05138 Vivi-Chr4 182666256 182666946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05138 1 51 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 88.235 2.05e-29 96.3