Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05106 ATGAGTATTGCAATTTTGCATTCAGGAATGTCTAGAGAAGTCATGGCTACTTCTTCATCTGCTGCTCCTTTTGATTATGAGATCTTGGATAAAGATCCTGACATCCCTAGAACAGCTGCGGTCCAATCCAATCGGACGAATCCGTGGATTGAGCCTGAAACTTTGAAACTTCAGCACCGAATTGGTAGAGGACCGTTTGGTGATGTTTGGCTTGCAACTCTTCATCAGTCAACTGAGGATTATGATGAGCATCATGAAGTTGCTGCTAAGATGTTGCATCCGGTTAGAGAGGATCATGTGAAGATTGTACTGGAGAAGTTCAATGATTTGTACTTGAAGTGCCAAGGAGTTTCTAGTGTTTCTTGGATACATGGAGTTTCAATGATAAATGGAAGGATCTGCATCATTATGAAATTGTATGAAGGTTCAATTGGTGACAAGATGGCTAGATTAAGAGAAGGATGGATTTCACTACATGATGTTTTGAGGTATGGGATCAATCTGGCTCAAGGTATTCTGGAGCTTCACTCTAAAGGGATCCTTGTTCTGAACCTTAAACCTTGCAATGTTCTTCTCAATGACAATGGTCAAGCGATTTTGGGAGATATTGGTATTCCCAATCTTTTGCTTGGTTCCTCATTCGTTAGCTCAGATATCGCTCAGAGGCTTGGAACTCCTAATTACATGGCTCCAGAGCAATGGAAACCAGAGGTTGGAGGTCCTATATCAATTGAAACGGATTCATGGGGCTTTGGTTGCACCATTGTTGAAATGTTGACTGGTAACCAACCTTGGTATGGATGCCCTGTTGGTGGAATTTATGGATCAGTTGTTGAAAAGCATGAAAAGCCGCTTATCCCAAGTGGCCTTCCTTCTCCCATCGAGAATATTCTTAGTGGATGTTTTGAGTATGATTTAAGGAACCGCCCTTTGATGATAGATATTCTGCGCGTCTTTAAAAGCTCGCTGAGTAAACTGGGCAATGATGGAGGATGGAGATATCAAGGAAATATGAAAGTAATTGCAAAATCAGGCAGCACCGACTACACTGAATGGTTCTTCTCAAAGGATCACCTGCAGGTGGGCGACATGGTCCGATCCAGAAAGTCTCCCAGCTCATGCAAAGCTCAAAACATGGATGTCCCAGAAGGAACTGTTGTTGGTCTAGAACGCACTGCAGATCACGGATTCGTTCTTGTGAGGGTCCACGGTATTCACGACCCTATAAGATTTCACGTGTCAACTCTCGAGCGGGTCACAGACGGCTTGGCAGCTGGTGATTGGGTACGAGTTAAAGATAAAAACCAGAAGCACTCACCGGTTGGCATTCTACATACCATCAATCGTGATGATGGTAGAGCTGCTGTTGGATTTATCGGACTGCAAACTCTCTGGAACGGACACCCTTCTGACCTCGAAATGTCAGAGTCGTTCTGTGTAGGACAGTTCGTTAGGCCAAAAGAGAATATTTTAAGCCCTCGATTTGAATGGCGTCGTAAAAGAGGAGGGGCCTCAGCTACCGGTCGGATTTCGTGGATTCTGCCAAACGGGTGTTTGGTAATCAAGTTCCCAGGGTTGCTGACTTTTGGGAATGAATCAATCACCTTTTTGGCTGATCCTTCTGAAGTTGAAATAGTTAATTTCAAGGCCTGTCCTGGGATTATAGAAAAGTATCAACATGTCGAGGATCATCATTGGGCAGTTAGACCTGTTCTAGTTGCACTTGGCATACTGACAGCTTTGAAACTAGGTATATTAGCCGGAAACAAAGTAAGGAGGTGCAAGAAGTTTAATGCAATAATAGAAAGCAAAAACCAACATCTTGAAGGTCAAAACCCCAATAGTCCTACAAGGAATATAATGAGTCATGGCAACACAACCTGGGTTCCTTCAGTTGCTAATATCCTTTTTAAAGATGGTGCTTAA 1926 0.4325 MSIAILHSGMSREVMATSSSAAPFDYEILDKDPDIPRTAAVQSNRTNPWIEPETLKLQHRIGRGPFGDVWLATLHQSTEDYDEHHEVAAKMLHPVREDHVKIVLEKFNDLYLKCQGVSSVSWIHGVSMINGRICIIMKLYEGSIGDKMARLREGWISLHDVLRYGINLAQGILELHSKGILVLNLKPCNVLLNDNGQAILGDIGIPNLLLGSSFVSSDIAQRLGTPNYMAPEQWKPEVGGPISIETDSWGFGCTIVEMLTGNQPWYGCPVGGIYGSVVEKHEKPLIPSGLPSPIENILSGCFEYDLRNRPLMIDILRVFKSSLSKLGNDGGWRYQGNMKVIAKSGSTDYTEWFFSKDHLQVGDMVRSRKSPSSCKAQNMDVPEGTVVGLERTADHGFVLVRVHGIHDPIRFHVSTLERVTDGLAAGDWVRVKDKNQKHSPVGILHTINRDDGRAAVGFIGLQTLWNGHPSDLEMSESFCVGQFVRPKENILSPRFEWRRKRGGASATGRISWILPNGCLVIKFPGLLTFGNESITFLADPSEVEIVNFKACPGIIEKYQHVEDHHWAVRPVLVALGILTALKLGILAGNKVRRCKKFNAIIESKNQHLEGQNPNSPTRNIMSHGNTTWVPSVANILFKDGA 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05106 641 Gene3D Transferase(Phosphotransferase) domain 1 141 350 - -
Vivi4g05106 641 ProSiteProfiles Protein kinase domain profile. 55 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05106 641 PANTHER OS06G0639500 PROTEIN 10 640 - -
Vivi4g05106 641 CDD STKc_PknB_like 56 321 - -
Vivi4g05106 641 Pfam Protein tyrosine and serine/threonine kinase 55 317 IPR001245 GO:0004672|GO:0006468
Vivi4g05106 641 Gene3D Phosphorylase Kinase; domain 1 33 138 - -
Vivi4g05106 641 SUPERFAMILY Protein kinase-like (PK-like) 54 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05106 Vivi-Chr4 182122052 182125215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05106 35 327 MAP Kinase Kinase Kinase AT2G17700 24.832 6.70e-20 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Vivi4g05106 PK_Tyr_Ser-Thr 3.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05106 - - gsj:114393396 1003.82