Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05105 ATGTCTAGAGAAGTCATGGCTACTTCTTCATCTGCTGCTCCTTTTGATTATGAGATCTTGGATAAAGATCCTGACATCCCTAGAACAGCTGCGGTCCAATCCAATCGGACGAATCCGTGGATTGAGCCTGAAACTTTGAAACTTCAGCACCGAATTGGTAGAGGACCGTTTGGTGATGTTTGGCTTGCAACTCTTCATCAGTCAACTGAGGATTATGATGAGCATCATGAAGTTGCTGCTAAGATGTTGCATCCGGTTAGAGAGGATCATGTGAAGATTGTACTGGAGAAGTTCAATGATTTGTACTTGAAGTGCCAAGGAGTTTCTAGTGTTTCTTGGATACATGGAGTTTCAATGATAAATGGAAGGATCTGCATCATTATGAAATTGTATGAAGGTTCAATTGGTGACAAGATGGCTAGATTAAGAGAAGGATGGATTTCACTACATGATGTTTTGAGGTATGGGATCAATCTGGCTCAAGGTATTCTGGAGCTTCACTCTAAAGGGATCCTTGTTCTGAACCTTAAACCTTGCAATGTTCTTCTCAATGACAATGGTCAAGCGATTTTGGGAGATATTGGTATTCCCAATCTTTTGCTTGGTTCCTCATTCGTTAGCTCAGATATCGCTCAGAGGCTTGGAACTCCTAATTACATGGCTCCAGAGCAATGGAAACCAGAGGTTGGAGGTCCTATATCAATTGAAACGGATTCATGGGGCTTTGGTTGCACCATTGTTGAAATGTTGACTGGTAACCAACCTTGGTATGGATGCCCTGTTGGTGGAATTTATGGATCAGTTGTTGAAAAGCATGAAAAGCCGCTTATCCCAAGTGGCCTTCCTTCTCCCATCGAGAATATTCTTAGTGGATGTTTTGAGTATGATTTAAGGAACCGCCCTTTGATGATAGATATTCTGCGCGTCTTTAAAAGCTCGCTGAGTAAACTGGGCAATGATGGAGGATGGAGATATCAAGGAAATATGAAAGTAATTGCAAAATCAGGCAGCACCGACTACACTGAATGGTTCTTCTCAAAGGATCACCTGCAGGTGGGCGACATGGTCCGATCCAGAAAGTCTCCCAGCTCATGCAAAGCTCAAAACATGGATGTCCCAGAAGGAACTGTTGTTGGTCTAGAACGCACTGCAGATCACGGATTCGTTCTTGTGAGGGTCCACGGTATTCACGACCCTATAAGATTTCACGTGTCAACTCTCGAGCGGGTCACAGACGGCTTGGCAGCTGGTGATTGGGTACGAGTTAAAGATAAAAACCAGAAGCACTCACCGGTTGGCATTCTACATACCATCAATCGTGATGATGGTAGAGCTGCTGTTGGATTTATCGGACTGCAAACTCTCTGGAACGGACACCCTTCTGACCTCGAAATGTCAGAGTCGTTCTGTGTAGGACAGTTCGTTAGGCCAAAAGAGAATATTTTAAGCCCTCGATTTGAATGGCGTCGTAAAAGAGGAGGGGCCTCAGCTACCGGTCGGATTTCGTGGATTCTGCCAAACGGGTGTTTGGTAATCAAGTTCCCAGGGTTGCTGACTTTTGGGAATGAATCAATCACCTTTTTGGCTGATCCTTCTGAAGTTGAAATAGTTAATTTCAAGGCCTGTCCTGGGATTATAGAAAAGTATCAACATGTCGAGGATCATCATTGGGCAGTTAGACCTGTTCTAGTTGCACTTGGCATACTGACAGCTTTGAAACTAGGTATATTAGCCGGAAACAAAGTAAGGAGGTGCAAGAAGTTTAATGCAATAATAGAAAGCAAAAACCAACATCTTGAAGGTCAAAACCCCAATAGTCCTACAAGGAATATAATGAGTCATGGCAACACAACCTGGGTTCCTTCAGTTGCTAATATCCTTTTTAAAGATGGTGCTTAA 1899 0.4339 MSREVMATSSSAAPFDYEILDKDPDIPRTAAVQSNRTNPWIEPETLKLQHRIGRGPFGDVWLATLHQSTEDYDEHHEVAAKMLHPVREDHVKIVLEKFNDLYLKCQGVSSVSWIHGVSMINGRICIIMKLYEGSIGDKMARLREGWISLHDVLRYGINLAQGILELHSKGILVLNLKPCNVLLNDNGQAILGDIGIPNLLLGSSFVSSDIAQRLGTPNYMAPEQWKPEVGGPISIETDSWGFGCTIVEMLTGNQPWYGCPVGGIYGSVVEKHEKPLIPSGLPSPIENILSGCFEYDLRNRPLMIDILRVFKSSLSKLGNDGGWRYQGNMKVIAKSGSTDYTEWFFSKDHLQVGDMVRSRKSPSSCKAQNMDVPEGTVVGLERTADHGFVLVRVHGIHDPIRFHVSTLERVTDGLAAGDWVRVKDKNQKHSPVGILHTINRDDGRAAVGFIGLQTLWNGHPSDLEMSESFCVGQFVRPKENILSPRFEWRRKRGGASATGRISWILPNGCLVIKFPGLLTFGNESITFLADPSEVEIVNFKACPGIIEKYQHVEDHHWAVRPVLVALGILTALKLGILAGNKVRRCKKFNAIIESKNQHLEGQNPNSPTRNIMSHGNTTWVPSVANILFKDGA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05105 632 SUPERFAMILY Protein kinase-like (PK-like) 45 309 IPR011009 -
Vivi4g05105 632 Gene3D Transferase(Phosphotransferase) domain 1 132 341 - -
Vivi4g05105 632 PANTHER OS06G0639500 PROTEIN 1 631 - -
Vivi4g05105 632 Pfam Protein tyrosine and serine/threonine kinase 46 308 IPR001245 GO:0004672|GO:0006468
Vivi4g05105 632 CDD STKc_PknB_like 47 312 - -
Vivi4g05105 632 Gene3D Phosphorylase Kinase; domain 1 24 129 - -
Vivi4g05105 632 ProSiteProfiles Protein kinase domain profile. 46 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05105 Vivi-Chr4 182121620 182125215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05105 26 318 MAP Kinase Kinase Kinase AT2G17700 24.832 8.62e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Vivi4g05105 PK_Tyr_Ser-Thr 3.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05105 - - gsj:114393396 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05105 4 182121620 182125215 Vivi4g05105 4 182121620 182125215 ECH
Vivi4g05104 4 182121462 182125215 Vivi4g05105 4 182121620 182125215 ECH
Vivi4g05105 4 182121620 182125215 Vivi4g05104 4 182121462 182125215 PCT