Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05099 ATGAAAAAACATTGGACTTGGTTGTGTTTATGTATCCTACTTTGGTCTAAACTAGTTTTGGTTATGGCTGGTATTCAATGGATTGGAAAGATCTCACCTGGATTTGAAGGGTCACAGATGAATTGGATTGATAAGAATGGAAAGTTTCTTGTCTCAAACACAAAACAATATGGTTTTGGCTTTGTCACATCTTCATACAACAACACATTGTTCCATCTTGCAATAGTCCACATGGATAGCACCAAAATCATTTGGACTGCAAATAGAGAATCTCCTGTTTCAAGTTCTGATAAATTTGTGTTTGATGAAAAGGGTAATGTTTTTTTACAAAAAGGAAAGTTTTTGATTTGGTCAACAAACACAAGTGACATGAAGGTTTCATCAATGGAGTTACAAGATAATGGAAACTTGGTTTTGCTTGGAAATGATGACAGGAATGTGATTTGGCAAAGCTTTGATCATCCAACAGATACTTTGTTGCCAATGCAAAACTTCACCAAAGGAATGATACTTATCAGTGAGCAAGATTCTTCTAACAATTTGAGTTATGTGCTTGAGATTGAAGCTCATTCTGGTAATGTTGTTCTTTCCAGTGGTTTACAATCTCCACAAAGCTATTGGTCTATGCAGAAAGATATCCGAAGAGTCGTCAATGAAAACGGCGATGATGTAGCTTTTGCAACTCTTGATGCAAATTCATGGAAATTCTATGATAATGAGAGATCTTTGTTGTGGCAATTTATCATTTCTAAGGATGATGATTCAAATGCAACATGGATTGCAGTTTTGGGAAGTGATGGAATTATTACTTTCACCAATCTTCAAGTTAAAGGCTCAATTGCTTCATCAACAAGAAAAATACCAGAAGATCCTTGTAGTACACCACAGCCTTGTGGTTCTTACAATGTATGTTTTGGTGACAGAAAATGTAGCTGTCCTTCTGTTCTTAGCTCTAGACCTAGTTGTCAACCGGGTTTTGTTTCGCCTTGTAACTCGGAAAATTCTATTGAGTTAGTGAAAGGTGATGATGGACTTGGTTACTTTGCACTTGAATTTCTTCAACCTTCTTCGAAAACCGATTTGATTGGTTGCAAGAATTCTTGTTGTGAAAATTGTTCATGTCTTGCTATGTTCTTTCATGGGAGTTCAGGTAACTGTTATATGTTGGATAGGATTGGAAGCTTTGTGAAATCTGATAATGATACTGATTTTGTCTCTTACATTAAAGTTTCGAGAGACAGAAGCACGGACACAGACACGGACATTGCAGGGAGCGGAAACAAGAATACGCAAGCAATAGTTGTTGTGATCATTGTGATATTAACATTGTTTGTCATTTCTGGTATGATTTATGTGGGACTAAAATTCTTAAAGAAAAAGGAAAATTCATCCGATTCTCCGATCGAGAATTCGGACGGCGATGACGATTTCTTGGAGAGTTTAACTAGTATGCCGATCCGTTTCAGCTACAACGATCTAGAAACTGCGACGAATAGCTTCGCGGTGAAGTTAGGTCAAGGTGGTTTCGGCTCGGTATATAAGGGAAGTCTTTCAGATGGAACTCAAATAGCTGTGAAAAAGTTAGAAGGAATAGGTCAAGGGAAGAAAGAATTTAGAGTTGAAGTTAGCATTATTGGAAGCATTCATCATCATCATTTGGTAAGGCTTAAAGGGTTTTGTGCAGAAGCATCACATAAACTTCTTGTTTATGAGTATATGGAAAATGGTTCATTAGATAAATGGATATTCAAAAAAAGAGAACAATATTTGGATTGGAACACAAGGTACAACATTGCACTAGGAACAGCTAAAGGACTAGCTTATCTACATGAAGATTGTGATTCAAAGATTGTTCATTGTGATATCAAACCAGAAAATGTGCTCTTAGACAATAATTTCGAAGCCAAAGTATCCGATTTCGGTCTCGCGAAGCTCATGAACCGCGAACAAAGCCATGTTTTCACAACAATGAGAGGGACAAGAGGGTACTTAGCACCAGAGTGGATCACAAACTATGCTATATCAGAGAAAAGTGATGTTTATAGCTATGGAATGGTGCTGTTAGAAATTATAGGTGGAAGGAAAAACTATGATGCTAGTGAAAATTCGGAGAAAGCGCATTTTCCTTCTTATGCTTATAAGATGATGGAACAAGGGAAGGTGGAGGATTTGATTGATCCTGAAGTGAAAATGGTTGAAAATGATGTGAGAGTTGAGATTGCTTTGAATGTTGCATTTTTGTGTATACAAGAAGATATGAGTTTGAGGCCTTCTATGAATAAAGTTGTGCAAATGCTTGAGGGGTTATGTGATGTTCCTAAGGTGCCAAAAGGTTCTCCTTTAGGTTCTAAGTTTTATTTGAATTTGCTTAGACCTACAAGTGAGGTTGGAACTTCTTCAGAACCATTAGAGGGGAATAGTGATGCATATCTCTCTGCTGTTAGACTTTCAGGACCAAGATAA 2463 0.3707 MKKHWTWLCLCILLWSKLVLVMAGIQWIGKISPGFEGSQMNWIDKNGKFLVSNTKQYGFGFVTSSYNNTLFHLAIVHMDSTKIIWTANRESPVSSSDKFVFDEKGNVFLQKGKFLIWSTNTSDMKVSSMELQDNGNLVLLGNDDRNVIWQSFDHPTDTLLPMQNFTKGMILISEQDSSNNLSYVLEIEAHSGNVVLSSGLQSPQSYWSMQKDIRRVVNENGDDVAFATLDANSWKFYDNERSLLWQFIISKDDDSNATWIAVLGSDGIITFTNLQVKGSIASSTRKIPEDPCSTPQPCGSYNVCFGDRKCSCPSVLSSRPSCQPGFVSPCNSENSIELVKGDDGLGYFALEFLQPSSKTDLIGCKNSCCENCSCLAMFFHGSSGNCYMLDRIGSFVKSDNDTDFVSYIKVSRDRSTDTDTDIAGSGNKNTQAIVVVIIVILTLFVISGMIYVGLKFLKKKENSSDSPIENSDGDDDFLESLTSMPIRFSYNDLETATNSFAVKLGQGGFGSVYKGSLSDGTQIAVKKLEGIGQGKKEFRVEVSIIGSIHHHHLVRLKGFCAEASHKLLVYEYMENGSLDKWIFKKREQYLDWNTRYNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDNNFEAKVSDFGLAKLMNREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDASENSEKAHFPSYAYKMMEQGKVEDLIDPEVKMVENDVRVEIALNVAFLCIQEDMSLRPSMNKVVQMLEGLCDVPKVPKGSPLGSKFYLNLLRPTSEVGTSSEPLEGNSDAYLSAVRLSGPR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05099 820 FunFam S-receptor-like kinase 5 573 775 - -
Vivi4g05099 820 ProSiteProfiles Bulb-type lectin domain profile. 35 152 IPR001480 -
Vivi4g05099 820 SUPERFAMILY Protein kinase-like (PK-like) 479 767 IPR011009 -
Vivi4g05099 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 173 IPR036426 -
Vivi4g05099 820 Pfam D-mannose binding lectin 83 166 IPR001480 -
Vivi4g05099 820 Pfam Protein kinase domain 502 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05099 820 Gene3D Transferase(Phosphotransferase) domain 1 573 775 - -
Vivi4g05099 820 Gene3D - 41 154 IPR036426 -
Vivi4g05099 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Vivi4g05099 820 CDD STKc_IRAK 504 769 - -
Vivi4g05099 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 776 - -
Vivi4g05099 820 ProSitePatterns Protein kinases ATP-binding region signature. 504 527 IPR017441 GO:0005524
Vivi4g05099 820 CDD B_lectin 43 155 IPR001480 -
Vivi4g05099 820 PIRSF SRK 4 814 IPR024171 GO:0004674
Vivi4g05099 820 FunFam Serine/threonine-protein kinase 37 153 - -
Vivi4g05099 820 SMART serkin_6 498 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05099 820 SMART blect_4 41 155 IPR001480 -
Vivi4g05099 820 Gene3D Phosphorylase Kinase; domain 1 468 572 - -
Vivi4g05099 820 FunFam serine/threonine-protein kinase PBS1-like 468 572 - -
Vivi4g05099 820 ProSiteProfiles Protein kinase domain profile. 498 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05099 Vivi-Chr4 182014481 182017733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05099 477 776 Receptor kinase-like Gene Family AT5G20050 47.003 2.67e-87 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi4g05099 Pkinase 1.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05099 - - gmx:100787500 1120.53