Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05086 ATGACAATATCATTGTTTGATGGGAAAGAAGATGCATATTGGTGGATTCTATGTTTGGAGAAATTTTTCAAAGAACATGAAACACCCAAGTCATTGAAGGTTTTAAAAGCTGTTGGAGCATTGAGAGGCGCTGCTTTCACATGGTGGATATGGTGGTCTCGTGTTCATCGTAGATATAGTTGGGATACTTTTACAACAACACTATTATGGCGTTTCAAACCGGAATGGAGACCCATTTTACCGATGGATGATGAAGAAGAGGAACCACCGTATGAATCAACGGAGTCCTTTTATTCAACCAATGATTATGTTGAGGAGAACGAAGAAGAAACTGTTAAAAAATCCTCGTTCTTGTACGAGCAAAATTGTATTGCAGCGGAGAACCTAGAAGAATCACCGGAGCAATCCAATCTATATGAAGATGAAACAAAACCACCATATAAGAAACCCATATTACCAATAGAAGATGAGGAAGAGGAACATGATGCGGATTATTGGGACAATGGGTTGCCTCTAATCCCAAATTCCTCCATCATTGCTTCTCACGATTTTGAAAATCTTGGCGATACTGTTAAAAATGAAACACCACAACAACCAGGCTCTTGCGTTCAGAAACCTAATTTGCTCAATTTCCTTCCTCATTGCTCATTAACATATTCCACAACCTGTGTGGGTTCCTATCCACGACCCATTTCCTCTGAAGCAATGCGTAAAGAATTCAACAACCCTACTGTTCTAATCGATGATGAGATACCCCCACCAAAACCTCCCGACGGAATCACGGTCATGGCATCGTCCCTCATGAATCCAACAATTTATGATTTATCTGTGTTCGCCATCACAGAGGAAAATCTTGATGCCAACTTCTCATGTTACTTTGCTCGGACACTTTCTCCATTGGGTTCTTCACTGCAACTTTCCAAGAAACCCCTCTGCAATATTGTTGATGATCCGGGTATTGGGGTTTTAAAAGTGGTCAACACAATCAGTTTCTTTAGTCTATATCGCGACTTCGCCGTCATCTTTACAAGTTTGGATATGGACCGTTCTTCATGTTTTATAAGCTTTAACTCTGTAAGCACTATCAGGGGAAGCATTACAAAATTTCTCATGAATTTGAGAAGACTATCCAAGATAAAGTCACACTCACTATCCAAAAAGACAACACAACCACGATTTTTGAATGCTAGAATTTTCGTCAATGGAACAGAATTAATTCAAACATTACCTCACACAGCTACAAGAGCATCCATGTTGGTTAGAATCAAGAAACTACGCCAAAGATACTCAGGAACAATATTTGAAATCATGGAGACAATAGCAAAATTTCTGAACCATAACATTGCACCATATCTTCCGTTAAGAAGCACAATCAATGCATCAGGTAACTTAGTTCATTTATCATATGTTGTTGGCCTTTTAGTTGGAATACCGAACACAAAACCTATTGGATCTGATGGAAAAATTCTCAATGTTAAAGAGGCTTTTCATATAGCTGTAATCAAAACCGGTTTTTTTGAGTTGCAACCTAAAGAAGGTTTGGCCCTGGTGAATTGTACCACTGTTGGATCAAGTTTGGCTTCATTGGTTCTTTTTGAGACAAATTCACTTATTGTTTTGTCGGAACTTTTGTCGATAATTTTCACTGAGGTTATGCAACGAAGACCTGAATTCAGTGACCATCTCACTCATAAGTTGAAACACCATCTTGGTCAAAGTGACGCTGCTGCTATAATGGAACATATTTTAGATGGAAGTTACTATGTTAAGGCTGCACATAAAGTTCATGAAATTGGTCCACTTCAGAAGCTTAAACAAGATAGGTATGTGCTTCGAATGTTGCCTCAGTGGCTTGGAAGGCAGATTGAAGTAATTGATGCTTTTCTAAATGAGGAAGCAGCTGTTACAAAAGATGCTACTTAA 1923 0.3874 MTISLFDGKEDAYWWILCLEKFFKEHETPKSLKVLKAVGALRGAAFTWWIWWSRVHRRYSWDTFTTTLLWRFKPEWRPILPMDDEEEEPPYESTESFYSTNDYVEENEEETVKKSSFLYEQNCIAAENLEESPEQSNLYEDETKPPYKKPILPIEDEEEEHDADYWDNGLPLIPNSSIIASHDFENLGDTVKNETPQQPGSCVQKPNLLNFLPHCSLTYSTTCVGSYPRPISSEAMRKEFNNPTVLIDDEIPPPKPPDGITVMASSLMNPTIYDLSVFAITEENLDANFSCYFARTLSPLGSSLQLSKKPLCNIVDDPGIGVLKVVNTISFFSLYRDFAVIFTSLDMDRSSCFISFNSVSTIRGSITKFLMNLRRLSKIKSHSLSKKTTQPRFLNARIFVNGTELIQTLPHTATRASMLVRIKKLRQRYSGTIFEIMETIAKFLNHNIAPYLPLRSTINASGNLVHLSYVVGLLVGIPNTKPIGSDGKILNVKEAFHIAVIKTGFFELQPKEGLALVNCTTVGSSLASLVLFETNSLIVLSELLSIIFTEVMQRRPEFSDHLTHKLKHHLGQSDAAAIMEHILDGSYYVKAAHKVHEIGPLQKLKQDRYVLRMLPQWLGRQIEVIDAFLNEEAAVTKDAT 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05086 640 SUPERFAMILY L-aspartase-like 406 628 IPR008948 GO:0003824
Vivi4g05086 640 Pfam Aromatic amino acid lyase 406 627 IPR001106 -
Vivi4g05086 640 Gene3D Fumarase/aspartase (Central domain) 521 631 - -
Vivi4g05086 640 Gene3D - 372 520 IPR024083 -
Vivi4g05086 640 PANTHER HISTIDINE AMMONIA-LYASE 380 627 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05086 Vivi-Chr4 181832430 181834397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05086 355 625 Monolignol Biosynthesis Gene Families AT3G53260 60.886 6.88e-100 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05086 K10775 - gmx:100818777 326.25