Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05074 ATGGCAAAGAAGAAGAACCCTATGGTGTTTATGGATGTGTCTATAGATGGGGATCCTTCTGAAAGAATGGTGTTTGAGCTTTTCCATGACGTTGCTCCTAAGACAGCTGAAAATTTTCGTGCACTGTGTACTGGAGAAAGAGGAGTCAGTCCTAATACTGGAAAATCACTGCACTACAAGGGCTCTTTCTTCCATCAAATCATAAAAGGCTCCATTGTGAAGGGTGGTGATTTTATTAATCGAAATGGGACTGGTGGAGAAAGCATTTATCCCAAGTTTCCAGATGAGTCTCCTAAGCTAAAGCATGATTCTCTAGGCCTTCTATCCATGGCCATTGCTGATCGTAACACTATTGGTTCACATTTTATCATCACTTTGAAAGCTGATCACCATCTGGATAGGAAGCATGTAGCTTTTGGCAAACTTGTGCTAGGGTATGATGTTTTGAAGAAAATTGAAGACGTGGGCGATGAAGAAGGACTCCCATCCGTAACTGTCAAAATAGTTAATAGTGGTGAACATAATGAGGATGGTAAGAAGACACACAAGTCAAAAATTGGAAGGAATGGATCTGCTGAAGCCATTAGTCATGAAGTGCGGAGGAAGGGAAAACATAAAAAATCTTCAGGAGACCGAAGGAAAAAGAGAAAACATTACTCATCAGAATCAGATAGCTCCTCAGATTCAGACACAGAATCTTCAGAAAGTGACAGTGACTCTGACTCAGATTTGTCCTCGTCATCTTACACAAGCTCGTCTAGTGATGACAGGCGGAGGAAGAGAAAGAGATCTAGGAAAGATAAACATCGACATGGAAAAAGAAGAGATAAACGCCGAGAAAAGAAGCGAAGGAAACTAGATAAGCGATCAAAACGTAAATCAAAGAGGGAATCAGACAGTCAAACTGATGCAGATAGTGCAAGTAAGAGTAACGATAGCTCCAGTGGCCAAGGTCTTGATACTCAAGGGAGAATTCAAAAGCACAAAGATCATTCTCAGAAAAATGCTGAAGTCCAGTCATCCTCAGTTTTGGAGAAAGAATCATCTCCTATTAATCTTAAAAAGAGGGAGGGGCTGAGCAATATAGAGGAGGGAGAATTCCCAAAGGAAAATGGAGCGCAGCGTAGCAACGGCATTGGGGCCAACCATAGATCTGACAGATATGAAGAGAGGCAGCCTGATGTGATGGATGATAATCCAGGGAAATCTAGGAGTCGAAGCATGAGTCCTAAGCAAACCTTGAGCAAGAGTATGAGTATTAGTCCCAATCGTGGGAGTAAAATCCCAAGCATTAGTCCAAAAGAAAGGTTGATCAGAAGTAAAAGCCCCCGTGCTCCATCACAGAGGAGTTTAAGCAGGAGTCCTGTTAGAAGCATCAACAGGAGTCTAAACAAAAGCATCAGCAGAAGCCCTGTGAGAGGGAGGAAGGGGAGAAGTATCAGTAGAAGCCCTGTGAGAACACACATTCATAGAAATGTCAGCAAGAGCCCTGTTAGAAGTCCTGACCGCAGAAGCATCAGCAGGAGTCTAAACAGAAGCATCAGCAGAAGCCCTGTGAGAGGGAGGAAGGGGAGAAGTATCAGTAGAAGCCCTGTGAGAACACACATTCATAGAAATGTCAGCAAGAGCCCTGTTAGAAGTCCTGACCGCAGAAGTTTTAGCAAGAGCCCTGTGAGATCTGTTTCTCAAAGCCGCAGGAGCAGGAGTTCTGCTAGAGTATCAACACGAAGAACGGTCAGTAGGAGTCCTGTGAGAGTGTCAAGAAAGAGCTTCAGCAGAAGTCCAATTAGATCACCTGCCAGAAGTCTCAGCAGAAGTTCCGGCCGAGCTCCTTTGAGAAGCATTAGCCAAAGTCCTGTTAGATTGGCAGGGAGAGACAATCACCGCAGCTATTCCAGGAGTCGTAGCCCTGTCCGTAGGGCAAGGACACCTCGTGAGAGGAGTCTGTCAAGGAGTGTGTCACCTGATGTTTCACCAAAACGTATCAGGAGAGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTACAGAACCCCCTCCCGGTCTCCTGTCAGGTACCGCTCCCGGTCTCCTGTCAGGTACCGCTCCCGGTCTCCTGTCAGGTACCGCTATAATGGAAGGAATGACCGTGACAGATATTCTGGATACAGAAGGTACTCCCCAAGGCGGAATAGGAGCCCACCTCCACGGAGAAGAACTTCACCAAGGTACCGAAGTAGGAGAAGCAGGTCACCATCTGTATCACGCAGCCCACCTCACCGTTCTCGACGGTATAGTCCAAGCCGTAGCCCGGTTCGCCATCGTTCACCTCCTCGTGTGAATAGGCGCATGTCATCATCCCTCAGCAGGAGTCCATCTCGATCGAGGTCATCTGTGGAATCACAATCTCCAAGAAAAGCAAGCAAAGATAACCGATCAAGGTCTTCGTCTAGAAGCTCCGATGGAGGGAAAGGCTTGGTGTCTTATGGAAATGGCTCTCCTGATTCAAGCCAAAAATGA 2505 0.4615 MAKKKNPMVFMDVSIDGDPSERMVFELFHDVAPKTAENFRALCTGERGVSPNTGKSLHYKGSFFHQIIKGSIVKGGDFINRNGTGGESIYPKFPDESPKLKHDSLGLLSMAIADRNTIGSHFIITLKADHHLDRKHVAFGKLVLGYDVLKKIEDVGDEEGLPSVTVKIVNSGEHNEDGKKTHKSKIGRNGSAEAISHEVRRKGKHKKSSGDRRKKRKHYSSESDSSSDSDTESSESDSDSDSDLSSSSYTSSSSDDRRRKRKRSRKDKHRHGKRRDKRREKKRRKLDKRSKRKSKRESDSQTDADSASKSNDSSSGQGLDTQGRIQKHKDHSQKNAEVQSSSVLEKESSPINLKKREGLSNIEEGEFPKENGAQRSNGIGANHRSDRYEERQPDVMDDNPGKSRSRSMSPKQTLSKSMSISPNRGSKIPSISPKERLIRSKSPRAPSQRSLSRSPVRSINRSLNKSISRSPVRGRKGRSISRSPVRTHIHRNVSKSPVRSPDRRSISRSLNRSISRSPVRGRKGRSISRSPVRTHIHRNVSKSPVRSPDRRSFSKSPVRSVSQSRRSRSSARVSTRRTVSRSPVRVSRKSFSRSPIRSPARSLSRSSGRAPLRSISQSPVRLAGRDNHRSYSRSRSPVRRARTPRERSLSRSVSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRYRSRSPVRYRSRSPVRYRYNGRNDRDRYSGYRRYSPRRNRSPPPRRRTSPRYRSRRSRSPSVSRSPPHRSRRYSPSRSPVRHRSPPRVNRRMSSSLSRSPSRSRSSVESQSPRKASKDNRSRSSSRSSDGGKGLVSYGNGSPDSSQK 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05074 834 MobiDBLite consensus disorder prediction 554 614 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 757 775 - -
Vivi4g05074 834 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 171 IPR002130 GO:0000413|GO:0003755
Vivi4g05074 834 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 181 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 200 214 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 349 370 - -
Vivi4g05074 834 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Vivi4g05074 834 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 121 IPR002130 GO:0000413|GO:0003755
Vivi4g05074 834 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Vivi4g05074 834 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 149 IPR002130 GO:0000413|GO:0003755
Vivi4g05074 834 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Vivi4g05074 834 MobiDBLite consensus disorder prediction 402 428 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 776 797 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 382 401 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 471 493 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 704 720 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 813 834 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 443 469 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 172 187 - -
Vivi4g05074 834 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 626 649 - -
Vivi4g05074 834 Gene3D - 1 174 IPR029000 -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 657 677 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 798 812 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 725 745 - -
Vivi4g05074 834 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 173 IPR002130 GO:0000413|GO:0003755
Vivi4g05074 834 MobiDBLite consensus disorder prediction 304 322 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 168 834 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 518 540 - -
Vivi4g05074 834 MobiDBLite consensus disorder prediction 258 291 - -
Vivi4g05074 834 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05074 Vivi-Chr4 181691507 181704024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05074 26 171 U-box Gene Family AT5G67530 39.597 1.41e-18 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05074 K09566 - gmx:100785820 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05074 4 181691507 181704024 Vivi4g05074 4 181691507 181704024 ECH