Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi4g05058 | ATGGAGAGCCATGAAGTAACTAGAGTTGAGAGTTTAAGAAGAGTTAGTAGTTCTTCCATGTGGAGGAACAATAGTATGGATATTTTCTCAACATCTGAACGTGAAGATGATGAAGAAGCACTTAAATGGGCTGCTATTGAGAGATTACCAACGTATTTAAGGATTAGAAGAAGCATAATCAGTAATGAGGAAGGTGAAGGGAGAGAGATTGATATCAAGAAGCTTGGATTGACTGAGAGAAAGGTTTTGTTAGAGAGACTTGTGAAGATTGCTGAAGAAGATAATGAAAAGTTCTTGTTGAAACTCAAGGAGAGAATGGATAGAGTTGGAGTTGATATTCCAACAGTTGAAGTGAGATTTGAGCATGTGAATGTTGAAGCTCGGGTTTATGTTGGAGGAAGAGCTTTACCTTCATTGTTCAACTTCTTTAGTAATGGCTTAGAGGGATTTTTGAATTATCTTCATGTTATTCCTAGTCCAAAGAAATCATTGCATATTCTTCAAAATGTTAGTGGAATCATAAAGCCTCAAAGAATGACATTACTTTTAGGGCCACCAGGCTCTGGAAAAACAACTTTGCTTTTGGCCTTGGCTGGAAAACTTGCTAAAGAATTGAAACAATCTGGGAGAGTAACATACAATGGAAAAGGACTAGATGAGTTTGTGCCACAAAGAACATCAGCTTATATAAGTCAACATGATAATCACATTGGAGAAATGACTGTTAGAGAAACCCTAGCTTTCTCAGCAAGGTGTCAAGGGGTTGGACACAATTATGATATGTTGACTGAACTACTAAGAAGAGAAAAGGAAGCAAAGATTAAACCAGATCCCGATATTGATGCCTACATGAAGGCAGCAGCACTAGAAGGACAGCAGGCGAGCGTGGTAACCGACTATATTCTCAAGATATTAGGACTTGAAATATGTGCCGACATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGAGGACAGAAAAAGAGAGTCACAACAGGCGAGATGCTGGTTGGACCTATAAGAGTGTTGTTCATGGATGAGATATCAACTGGTTTGGACAGTTCAACAACTTTTCAAATAATCAGCTCGATCAGACAATCGATCCATATTCTGAACGGAACTGCACTTGTGTCTCTTCTACAGCCAGCACCGGAAACTTATGACTTATTTGATGATATCATACTTCTCACAGATGGACAAATTGTGTATCAAGGACCGAGAGAGAATGTACTTGAGTTCTTCGAATCAATGGGATTCAAGTGCCCCGAGAGAAAAGGCATCGCAGATTTCTTACAAGAAGTGACATCAAGAAAAGATCAATGGCAATATTGGGCGAATAAAGACGAACCGTATAGTTTTGTTACTGTCAAGGATTTTGCCGAAGCCTTTCAGATATTTCACATTGGTCAAAAACTTGGAGATGAACTAGCTAATCCTTTCGACAAATCTAAATCCCCCGCAAATATCTTGACTACAAAGAAATATGGTGTTAACATGAAGGAGTTGTTAAAGGCTTGTGCTAGCAGAGAGTTTTTGCTTATGAAGCGAAATTCGTTTGTCCATATATTCAAAGTCACTCAACTTATTTATTTAGCAATCATGACAACAACATTGTTTCTAAGAACTAAGATGCATAAGGATTCAGTGGAAGATGGAGGAACATACATGGGAGCACTATTCTTTACTGTGCTAGTAGCAATGTTCAACGGAATATCAGAGCTAAACATGACTATCATGAAACTTCCTGTCTTTTACAAGCAAAGAGATCTTCTTTTCTATCCCTCTTGGGCTTATTCACTTCCACCATGGATCCTCAAAATACCGATAACTCTCGTAGAAGTTGCTATTTGGGAAGCTATCACTTACTATGCCGTTGGCTATGATCCAAGTTTTCTAAGGCTTTTAAAACAGTACTTGATATTACTATGCATTAACCAGATGGCATCTTCACTATTTCGGTTAATGGCTGCGTTAGGAAGGAATGTCATAGTTGCAAACACTGTTGGGTCATTTGCATTGCTAGTAGTTATGGTTTTGGGAGGATTTGTGATTTCAAGAGAGGACGTGCACAAATGGTTTCTTTGGGGTTATTGGTCGTCGCCATTGATGTATGGACAGAATGCTATAGCTGTGAATGAATTTCTTGGACATAGCTGGAGAAAGGTTACTCAAAATTCCAATGAAACATTGGGAGTTTTGACAATGAAAACTCGCGGTTTTTTCCGACAAGCTTATTGGTATTGGATCGGTGTAGGAGCATTGATTGGTTATGTTTTTCTGTTTAACTTTCTGTTCACCTTGGCTTTAAAATATCTCAGCCCATTCAGAAAGGATCAAGCAGGACTATCAGAGGAGGAGTTGCAAGAGAGAGATGCTTCAATAGCTGAAGAGTGTACACAGTTACCGACTCGAAAAAGAATTTCTGAAACAAAGACGGCAGAAGAAGAACTTATGCCATCCGCATCTTTTTCTGCAAGAGTTGATAATGGTAAATCTAGTAGAAGTGGAAGGAGGGGCATGGTTCTTCCTTTTCAACCTCTATCCCTCACTTTTGATGAGATCAGATATGCGGTAGACATGCCACAGGAAATGAAAAGTCAAGGAGTTTTCGAGGATCGTCTCGAACTTTTGAAAGGTATCACTGGTGCCTTTAGGCCTGGAGTACTAACAGCATTGATGGGAGTAAGTGGTGCCGGAAAGACTACTCTAATGGATGTTTTAGCCGGAAGGAAAACCGGTGGATATATTGAAGGAAACATCACAATATCTGGCTATCCAAAGAATCAAAAAACATTTGCTCGCATATCAGGATATTGCGAACAATTTGATATCCACTCACCTAACGTTACAGTTTATGAATCTTTGCTATATTCCGCATGGCTTCGGTTACCACCTGAAGTTGATCAAGCTACAAGAAAGATGTTTATTGAAGAAGTTATGGAGCTTGTAGAACTTAACTCATTACGAGAAGCACTAGTTGGATTGCCAGGCGAGAATGGACTTTCAACCGAACAACGCAAAAGACTTACAATTGCGGTTGAACTTGTAGCCAATCCATCGATAATATTCATGGACGAACCAACCTCAGGCCTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACAGTGAGGAACACCGTGGACACAGGACGTACCGTAGTTTGCACGATCCATCAGCCAAGTATCGACATTTTCGACGCCTTTGATGAGCTTCTACTCATGAAATTGGGAGGTGAGCAAATATACGCTGGTCCATTAGGCCGCCACTGTTCTCATTTGATTCAATACTTCGAGGCTATTCAAGGAGTTCCTCAGATCAAGGATGGTTATAATCCTGCAACATGGATGTTGGAAGTTACATCAGCAGGATCAGAAGCAAATCTTAAGGTCAACTTCAGTAATGTGTACAGAAACTCGGAACTATACCGGAGAAACAAAGAATTGATCCAGGAATTAAGTATACCTCCTCAAGGTTCAAAGGATATATACTTCGATACACAATATACGCAAACTATGCTATCACAATGTAAAGCTTGTCTATGGAAACAACATTTATCGTATTGGCGAAACACCTCGTATACAGCAGTTAGACTGTTATTTACAACACTAATAGCATTCTTGTTTGGAATTATATTTTGGAACATTGGTTTGAAAAGGAGAAAGGAGCAAGATCTTTTCAATGCAATGGGATCAATGTATTCTTCTGTTATATTTATTGGAGTACAAAATGGTGCCTCAGTTCAGCCTGTAATAGCAGTTGAGAGAACAGTCTTTTATAGAGAAAGAGCTGCGGGAATGTATTCTGCTTTGCCTTATGCTGTAGCACAGGTTATTATAGAGCTTCCCCATATCTTGGCTCAGACCCTGATATATGGGATCATTGTATATGCTATGATGGGATTTGAGTGGACAGCATCAAAATTCTTATGGTATATTTTCTTCAATTACTTCACTTTCTTGTACTACACCTTCTATGGTATGATGACCATGGCCATAAGTCCCAACCAACATGTTGCTGCCATAATGTCCACTTCATTCTATGCAATATGGAACCTTTTCTCTGGCTTCATCATTCCCTTATCTAGAATACCAATATGGTGGAAGTGGTACTATTGGGTTTGTCCAGTTGCATGGACCTTATATGGATTGTTGGCTTCTCAATATGGAGACAGCATGGACAAACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTAAAAAATTACTTTGGTTTTGAACATGATTTTCTAGGAGTGGTTGCAATTGTTGTAGCTGGTTTCTCAGTGTTGTTTGCACTTATCTTCACCTTTGGCATCAAAGCATTCAACTTCCAAAAAAGATGA | 4344 | 0.393 | MESHEVTRVESLRRVSSSSMWRNNSMDIFSTSEREDDEEALKWAAIERLPTYLRIRRSIISNEEGEGREIDIKKLGLTERKVLLERLVKIAEEDNEKFLLKLKERMDRVGVDIPTVEVRFEHVNVEARVYVGGRALPSLFNFFSNGLEGFLNYLHVIPSPKKSLHILQNVSGIIKPQRMTLLLGPPGSGKTTLLLALAGKLAKELKQSGRVTYNGKGLDEFVPQRTSAYISQHDNHIGEMTVRETLAFSARCQGVGHNYDMLTELLRREKEAKIKPDPDIDAYMKAAALEGQQASVVTDYILKILGLEICADIMVGDGMIRGISGGQKKRVTTGEMLVGPIRVLFMDEISTGLDSSTTFQIISSIRQSIHILNGTALVSLLQPAPETYDLFDDIILLTDGQIVYQGPRENVLEFFESMGFKCPERKGIADFLQEVTSRKDQWQYWANKDEPYSFVTVKDFAEAFQIFHIGQKLGDELANPFDKSKSPANILTTKKYGVNMKELLKACASREFLLMKRNSFVHIFKVTQLIYLAIMTTTLFLRTKMHKDSVEDGGTYMGALFFTVLVAMFNGISELNMTIMKLPVFYKQRDLLFYPSWAYSLPPWILKIPITLVEVAIWEAITYYAVGYDPSFLRLLKQYLILLCINQMASSLFRLMAALGRNVIVANTVGSFALLVVMVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRKVTQNSNETLGVLTMKTRGFFRQAYWYWIGVGALIGYVFLFNFLFTLALKYLSPFRKDQAGLSEEELQERDASIAEECTQLPTRKRISETKTAEEELMPSASFSARVDNGKSSRSGRRGMVLPFQPLSLTFDEIRYAVDMPQEMKSQGVFEDRLELLKGITGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNITISGYPKNQKTFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPPEVDQATRKMFIEEVMELVELNSLREALVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKLGGEQIYAGPLGRHCSHLIQYFEAIQGVPQIKDGYNPATWMLEVTSAGSEANLKVNFSNVYRNSELYRRNKELIQELSIPPQGSKDIYFDTQYTQTMLSQCKACLWKQHLSYWRNTSYTAVRLLFTTLIAFLFGIIFWNIGLKRRKEQDLFNAMGSMYSSVIFIGVQNGASVQPVIAVERTVFYRERAAGMYSALPYAVAQVIIELPHILAQTLIYGIIVYAMMGFEWTASKFLWYIFFNYFTFLYYTFYGMMTMAISPNQHVAAIMSTSFYAIWNLFSGFIIPLSRIPIWWKWYYWVCPVAWTLYGLLASQYGDSMDKLENGQRVEEFVKNYFGFEHDFLGVVAIVVAGFSVLFALIFTFGIKAFNFQKR | 1447 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi4g05058 | 1447 | Gene3D | - | 154 | 458 | IPR027417 | - | |
Vivi4g05058 | 1447 | Pfam | ABC-2 type transporter | 382 | 433 | IPR043926 | GO:0140359 | |
Vivi4g05058 | 1447 | FunFam | ABC transporter G family member 34 | 154 | 458 | - | - | |
Vivi4g05058 | 1447 | Pfam | ABC-2 type transporter | 503 | 715 | IPR013525 | GO:0016020|GO:0140359 | |
Vivi4g05058 | 1447 | Pfam | ABC-2 type transporter | 1176 | 1389 | IPR013525 | GO:0016020|GO:0140359 | |
Vivi4g05058 | 1447 | Pfam | ABC-transporter N-terminal | 72 | 142 | IPR029481 | - | |
Vivi4g05058 | 1447 | FunFam | ABC transporter G family member 40 | 864 | 1094 | - | - | |
Vivi4g05058 | 1447 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 151 | 424 | IPR003439 | GO:0005524 | |
Vivi4g05058 | 1447 | SMART | AAA_5 | 176 | 401 | IPR003593 | GO:0016887 | |
Vivi4g05058 | 1447 | SMART | AAA_5 | 887 | 1079 | IPR003593 | GO:0016887 | |
Vivi4g05058 | 1447 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 850 | 1102 | IPR003439 | GO:0005524 | |
Vivi4g05058 | 1447 | Pfam | Plant PDR ABC transporter associated | 720 | 781 | IPR013581 | - | |
Vivi4g05058 | 1447 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 163 | 424 | IPR027417 | - | |
Vivi4g05058 | 1447 | PANTHER | PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 | 8 | 1447 | - | - | |
Vivi4g05058 | 1447 | Pfam | ABC transporter | 167 | 349 | IPR003439 | GO:0005524 | |
Vivi4g05058 | 1447 | Gene3D | - | 866 | 1099 | IPR027417 | - | |
Vivi4g05058 | 1447 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 873 | 1087 | IPR027417 | - | |
Vivi4g05058 | 1447 | CDD | ABCG_PDR_domain2 | 847 | 1085 | IPR034003 | - | |
Vivi4g05058 | 1447 | Pfam | ABC transporter | 878 | 1030 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi4g05058 | Vivi-Chr4 | 181521279 | 181528532 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi4g05058 | 888 | 1062 | Calmodulin-binding Proteins | AT2G36910 | 26.630 | 1.91e-06 | 50.8 |