Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05058 ATGGAGAGCCATGAAGTAACTAGAGTTGAGAGTTTAAGAAGAGTTAGTAGTTCTTCCATGTGGAGGAACAATAGTATGGATATTTTCTCAACATCTGAACGTGAAGATGATGAAGAAGCACTTAAATGGGCTGCTATTGAGAGATTACCAACGTATTTAAGGATTAGAAGAAGCATAATCAGTAATGAGGAAGGTGAAGGGAGAGAGATTGATATCAAGAAGCTTGGATTGACTGAGAGAAAGGTTTTGTTAGAGAGACTTGTGAAGATTGCTGAAGAAGATAATGAAAAGTTCTTGTTGAAACTCAAGGAGAGAATGGATAGAGTTGGAGTTGATATTCCAACAGTTGAAGTGAGATTTGAGCATGTGAATGTTGAAGCTCGGGTTTATGTTGGAGGAAGAGCTTTACCTTCATTGTTCAACTTCTTTAGTAATGGCTTAGAGGGATTTTTGAATTATCTTCATGTTATTCCTAGTCCAAAGAAATCATTGCATATTCTTCAAAATGTTAGTGGAATCATAAAGCCTCAAAGAATGACATTACTTTTAGGGCCACCAGGCTCTGGAAAAACAACTTTGCTTTTGGCCTTGGCTGGAAAACTTGCTAAAGAATTGAAACAATCTGGGAGAGTAACATACAATGGAAAAGGACTAGATGAGTTTGTGCCACAAAGAACATCAGCTTATATAAGTCAACATGATAATCACATTGGAGAAATGACTGTTAGAGAAACCCTAGCTTTCTCAGCAAGGTGTCAAGGGGTTGGACACAATTATGATATGTTGACTGAACTACTAAGAAGAGAAAAGGAAGCAAAGATTAAACCAGATCCCGATATTGATGCCTACATGAAGGCAGCAGCACTAGAAGGACAGCAGGCGAGCGTGGTAACCGACTATATTCTCAAGATATTAGGACTTGAAATATGTGCCGACATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGAGGACAGAAAAAGAGAGTCACAACAGGCGAGATGCTGGTTGGACCTATAAGAGTGTTGTTCATGGATGAGATATCAACTGGTTTGGACAGTTCAACAACTTTTCAAATAATCAGCTCGATCAGACAATCGATCCATATTCTGAACGGAACTGCACTTGTGTCTCTTCTACAGCCAGCACCGGAAACTTATGACTTATTTGATGATATCATACTTCTCACAGATGGACAAATTGTGTATCAAGGACCGAGAGAGAATGTACTTGAGTTCTTCGAATCAATGGGATTCAAGTGCCCCGAGAGAAAAGGCATCGCAGATTTCTTACAAGAAGTGACATCAAGAAAAGATCAATGGCAATATTGGGCGAATAAAGACGAACCGTATAGTTTTGTTACTGTCAAGGATTTTGCCGAAGCCTTTCAGATATTTCACATTGGTCAAAAACTTGGAGATGAACTAGCTAATCCTTTCGACAAATCTAAATCCCCCGCAAATATCTTGACTACAAAGAAATATGGTGTTAACATGAAGGAGTTGTTAAAGGCTTGTGCTAGCAGAGAGTTTTTGCTTATGAAGCGAAATTCGTTTGTCCATATATTCAAAGTCACTCAACTTATTTATTTAGCAATCATGACAACAACATTGTTTCTAAGAACTAAGATGCATAAGGATTCAGTGGAAGATGGAGGAACATACATGGGAGCACTATTCTTTACTGTGCTAGTAGCAATGTTCAACGGAATATCAGAGCTAAACATGACTATCATGAAACTTCCTGTCTTTTACAAGCAAAGAGATCTTCTTTTCTATCCCTCTTGGGCTTATTCACTTCCACCATGGATCCTCAAAATACCGATAACTCTCGTAGAAGTTGCTATTTGGGAAGCTATCACTTACTATGCCGTTGGCTATGATCCAAGTTTTCTAAGGCTTTTAAAACAGTACTTGATATTACTATGCATTAACCAGATGGCATCTTCACTATTTCGGTTAATGGCTGCGTTAGGAAGGAATGTCATAGTTGCAAACACTGTTGGGTCATTTGCATTGCTAGTAGTTATGGTTTTGGGAGGATTTGTGATTTCAAGAGAGGACGTGCACAAATGGTTTCTTTGGGGTTATTGGTCGTCGCCATTGATGTATGGACAGAATGCTATAGCTGTGAATGAATTTCTTGGACATAGCTGGAGAAAGGTTACTCAAAATTCCAATGAAACATTGGGAGTTTTGACAATGAAAACTCGCGGTTTTTTCCGACAAGCTTATTGGTATTGGATCGGTGTAGGAGCATTGATTGGTTATGTTTTTCTGTTTAACTTTCTGTTCACCTTGGCTTTAAAATATCTCAGCCCATTCAGAAAGGATCAAGCAGGACTATCAGAGGAGGAGTTGCAAGAGAGAGATGCTTCAATAGCTGAAGAGTGTACACAGTTACCGACTCGAAAAAGAATTTCTGAAACAAAGACGGCAGAAGAAGAACTTATGCCATCCGCATCTTTTTCTGCAAGAGTTGATAATGGTAAATCTAGTAGAAGTGGAAGGAGGGGCATGGTTCTTCCTTTTCAACCTCTATCCCTCACTTTTGATGAGATCAGATATGCGGTAGACATGCCACAGGAAATGAAAAGTCAAGGAGTTTTCGAGGATCGTCTCGAACTTTTGAAAGGTATCACTGGTGCCTTTAGGCCTGGAGTACTAACAGCATTGATGGGAGTAAGTGGTGCCGGAAAGACTACTCTAATGGATGTTTTAGCCGGAAGGAAAACCGGTGGATATATTGAAGGAAACATCACAATATCTGGCTATCCAAAGAATCAAAAAACATTTGCTCGCATATCAGGATATTGCGAACAATTTGATATCCACTCACCTAACGTTACAGTTTATGAATCTTTGCTATATTCCGCATGGCTTCGGTTACCACCTGAAGTTGATCAAGCTACAAGAAAGATGTTTATTGAAGAAGTTATGGAGCTTGTAGAACTTAACTCATTACGAGAAGCACTAGTTGGATTGCCAGGCGAGAATGGACTTTCAACCGAACAACGCAAAAGACTTACAATTGCGGTTGAACTTGTAGCCAATCCATCGATAATATTCATGGACGAACCAACCTCAGGCCTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACAGTGAGGAACACCGTGGACACAGGACGTACCGTAGTTTGCACGATCCATCAGCCAAGTATCGACATTTTCGACGCCTTTGATGAGCTTCTACTCATGAAATTGGGAGGTGAGCAAATATACGCTGGTCCATTAGGCCGCCACTGTTCTCATTTGATTCAATACTTCGAGGCTATTCAAGGAGTTCCTCAGATCAAGGATGGTTATAATCCTGCAACATGGATGTTGGAAGTTACATCAGCAGGATCAGAAGCAAATCTTAAGGTCAACTTCAGTAATGTGTACAGAAACTCGGAACTATACCGGAGAAACAAAGAATTGATCCAGGAATTAAGTATACCTCCTCAAGGTTCAAAGGATATATACTTCGATACACAATATACGCAAACTATGCTATCACAATGTAAAGCTTGTCTATGGAAACAACATTTATCGTATTGGCGAAACACCTCGTATACAGCAGTTAGACTGTTATTTACAACACTAATAGCATTCTTGTTTGGAATTATATTTTGGAACATTGGTTTGAAAAGGAGAAAGGAGCAAGATCTTTTCAATGCAATGGGATCAATGTATTCTTCTGTTATATTTATTGGAGTACAAAATGGTGCCTCAGTTCAGCCTGTAATAGCAGTTGAGAGAACAGTCTTTTATAGAGAAAGAGCTGCGGGAATGTATTCTGCTTTGCCTTATGCTGTAGCACAGGTTATTATAGAGCTTCCCCATATCTTGGCTCAGACCCTGATATATGGGATCATTGTATATGCTATGATGGGATTTGAGTGGACAGCATCAAAATTCTTATGGTATATTTTCTTCAATTACTTCACTTTCTTGTACTACACCTTCTATGGTATGATGACCATGGCCATAAGTCCCAACCAACATGTTGCTGCCATAATGTCCACTTCATTCTATGCAATATGGAACCTTTTCTCTGGCTTCATCATTCCCTTATCTAGAATACCAATATGGTGGAAGTGGTACTATTGGGTTTGTCCAGTTGCATGGACCTTATATGGATTGTTGGCTTCTCAATATGGAGACAGCATGGACAAACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTAAAAAATTACTTTGGTTTTGAACATGATTTTCTAGGAGTGGTTGCAATTGTTGTAGCTGGTTTCTCAGTGTTGTTTGCACTTATCTTCACCTTTGGCATCAAAGCATTCAACTTCCAAAAAAGATGA 4344 0.393 MESHEVTRVESLRRVSSSSMWRNNSMDIFSTSEREDDEEALKWAAIERLPTYLRIRRSIISNEEGEGREIDIKKLGLTERKVLLERLVKIAEEDNEKFLLKLKERMDRVGVDIPTVEVRFEHVNVEARVYVGGRALPSLFNFFSNGLEGFLNYLHVIPSPKKSLHILQNVSGIIKPQRMTLLLGPPGSGKTTLLLALAGKLAKELKQSGRVTYNGKGLDEFVPQRTSAYISQHDNHIGEMTVRETLAFSARCQGVGHNYDMLTELLRREKEAKIKPDPDIDAYMKAAALEGQQASVVTDYILKILGLEICADIMVGDGMIRGISGGQKKRVTTGEMLVGPIRVLFMDEISTGLDSSTTFQIISSIRQSIHILNGTALVSLLQPAPETYDLFDDIILLTDGQIVYQGPRENVLEFFESMGFKCPERKGIADFLQEVTSRKDQWQYWANKDEPYSFVTVKDFAEAFQIFHIGQKLGDELANPFDKSKSPANILTTKKYGVNMKELLKACASREFLLMKRNSFVHIFKVTQLIYLAIMTTTLFLRTKMHKDSVEDGGTYMGALFFTVLVAMFNGISELNMTIMKLPVFYKQRDLLFYPSWAYSLPPWILKIPITLVEVAIWEAITYYAVGYDPSFLRLLKQYLILLCINQMASSLFRLMAALGRNVIVANTVGSFALLVVMVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRKVTQNSNETLGVLTMKTRGFFRQAYWYWIGVGALIGYVFLFNFLFTLALKYLSPFRKDQAGLSEEELQERDASIAEECTQLPTRKRISETKTAEEELMPSASFSARVDNGKSSRSGRRGMVLPFQPLSLTFDEIRYAVDMPQEMKSQGVFEDRLELLKGITGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNITISGYPKNQKTFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPPEVDQATRKMFIEEVMELVELNSLREALVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKLGGEQIYAGPLGRHCSHLIQYFEAIQGVPQIKDGYNPATWMLEVTSAGSEANLKVNFSNVYRNSELYRRNKELIQELSIPPQGSKDIYFDTQYTQTMLSQCKACLWKQHLSYWRNTSYTAVRLLFTTLIAFLFGIIFWNIGLKRRKEQDLFNAMGSMYSSVIFIGVQNGASVQPVIAVERTVFYRERAAGMYSALPYAVAQVIIELPHILAQTLIYGIIVYAMMGFEWTASKFLWYIFFNYFTFLYYTFYGMMTMAISPNQHVAAIMSTSFYAIWNLFSGFIIPLSRIPIWWKWYYWVCPVAWTLYGLLASQYGDSMDKLENGQRVEEFVKNYFGFEHDFLGVVAIVVAGFSVLFALIFTFGIKAFNFQKR 1447
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05058 1447 Gene3D - 154 458 IPR027417 -
Vivi4g05058 1447 Pfam ABC-2 type transporter 382 433 IPR043926 GO:0140359
Vivi4g05058 1447 FunFam ABC transporter G family member 34 154 458 - -
Vivi4g05058 1447 Pfam ABC-2 type transporter 503 715 IPR013525 GO:0016020|GO:0140359
Vivi4g05058 1447 Pfam ABC-2 type transporter 1176 1389 IPR013525 GO:0016020|GO:0140359
Vivi4g05058 1447 Pfam ABC-transporter N-terminal 72 142 IPR029481 -
Vivi4g05058 1447 FunFam ABC transporter G family member 40 864 1094 - -
Vivi4g05058 1447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 151 424 IPR003439 GO:0005524
Vivi4g05058 1447 SMART AAA_5 176 401 IPR003593 GO:0016887
Vivi4g05058 1447 SMART AAA_5 887 1079 IPR003593 GO:0016887
Vivi4g05058 1447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 850 1102 IPR003439 GO:0005524
Vivi4g05058 1447 Pfam Plant PDR ABC transporter associated 720 781 IPR013581 -
Vivi4g05058 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 424 IPR027417 -
Vivi4g05058 1447 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 8 1447 - -
Vivi4g05058 1447 Pfam ABC transporter 167 349 IPR003439 GO:0005524
Vivi4g05058 1447 Gene3D - 866 1099 IPR027417 -
Vivi4g05058 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 873 1087 IPR027417 -
Vivi4g05058 1447 CDD ABCG_PDR_domain2 847 1085 IPR034003 -
Vivi4g05058 1447 Pfam ABC transporter 878 1030 IPR003439 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi4g05058 Vivi-Chr4 181521279 181528532 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05058 888 1062 Calmodulin-binding Proteins AT2G36910 26.630 1.91e-06 50.8