Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04965 ATGGCTTCTGGTTCTGGTTCTGGTTCTGGTTCTGTTGGTTGTAGTAGTGATAGTAGAATTGAGAATTTGATTTGTGCTACTAAATCATTGAAAGTTAGCTTAGAGAAATCAAAGACTGTTGGGTTAGGATTAGAGAAAGCAGGGCCAAGGTTAGATGAGATTAGGGTAAGGTTACCTTGGCTTGAATCTGCGGTTCGGCCGATTAGAGCTGAGAAGGATGCCCTTGTGGCGGTTGGAGGGCATATTAACAGGGCTGTTGGTCCTGCGGCTGCGGTGCTAAAGGTTTTCGATGCGGTTCATGGGCTTGAGAAGTCTTTGTTGTCGGATCCGCGGATTGATCTACCGGGTTACTTGTCGGTTTTGAAGCGACTTGAGGAGGCGTTGAGGTTTTTGGGAGATAATTGTGGGTTGGCTATTCAATGGTTGGATGATATAGTTGAGTATTTAGAAGATAATTCGGTTGCGGATCAGGTTTATCTTAAGAATTTGAAGAGGGAGTTGGAGAGTCTTAAGGAGTCGCAGAATGGTGATTTGGATGGTGGATTGTTAGATGCTGCTTTGGATAAGTTGGAGAATGAGTTCAGGTTGCTGTTAACTGAAAACAGTGTGCCGCTTCCTATGTCGTCGAATTCTCTTGGTGATCAGCCTTGCATCGCGCCTTCGCCTTTGCCTGTTTCGGTGGTTCACAAATTGCAGGCTATTCTTGGTAGGTTGAGGGCTAATGATAGACTTGACAAATGTGTTTCGATTTACGTTGAAGTTAGAAGTTCTAATGTTAGGGCAAGTTTGCAGGCATTGAATTTGGATTACCTTGAGATCTCGGTGTCCGAGTTCAATGATGTGCAGAGCATAGAGGTGTATATAGCTCAGTGGGGAAAGCATTTGGAATTTGCGGTGAAGCATTTGTTTGAGGCTGAGTATAAGCTTTGTAATGATGTGTTCGAGAGGCTTGGACTCGATGTATGGATGGGTTGCTTTTCAAAGATAGCTGCACAGGCTGGTATACTCGCGTTTCTTCAGTTTGGAAAGACTGTTACGGAAAGTAAGAAAGATCCCATTAAGCTTTTGAAGTTGTTGGATATTTTTGCGTCCTTGAACAAGTTGAGGCTGGATTTCAACCGTCTTTTTGGGGGAGATGCATGCGTCGAAATCCAGAATTTGACAAGGGAACTTATCAAAAGTGTGATCGATGGCGCAGCGGAAATTTTCTGGGAACTTCTGGTTCAGGTAGAGTTACAGAGACAGAGCCCTCCTCCTCCGGATGGCAATGTTCCTCGATTGGTGAGCTTTATCACGGATTACAGCAATAAACTCTTGGGGGACGACTACAAGCCTATACTGACCCAAGTTCTGATCATTCACCGAAGTTGGAAGCGTCAAAGTTTTCAGGAGAAGCTTCTCGTTAATGAGATTTTGAACATATTGAAAGCCATTGAGGCAAATTTGGATACATGGATAAAGGCTTACGACGATCCTATGTTGTCCAACTTTTTTGCCATGAACAATCACTGGCATCTGTTCAAGCATTTGAAAGGGACGAAACTCGGGGATCTTTTAGGAGATTCTTGGTTGAAGGAACACGAACAATATAAGGACTATTACTCCACAATATTCTTGCGAGATAGCTGGGGAAAGCTCCCTGGACATTTGAGTAGAGAAGGGCTGATTCTTTTCTCGGGAGGGCGCGCTACTGCTCGCGATCTGGTCAAGAAAAGATTGAAAAAGTTCAACGAAGTTTTCGACGAGATGTATTCAAAGCAATCAGGCTGGATCATGGTCGAGCGAGATCTAAGAGAAAAGACATGTCAGCTTATAGTGCAAGCCGTGGTGCCTGTTTACCGGAGTTACATGCAGAACTACGGTCCCTTGGTCGAGCAAGAAGCCAGTTCCAATAAATACGCAAAATACACAGTCCAGAAGCTTGAAGAAATGCTTCTATGTCTCTACCGGCCGAAGCCTGCAAGACACGGCAGCTTGAGAAGTCCGCAGCTTAGTGGAAAGTACGGAAACGGAATACCAGATCTTCGTCGTACAGCCTCTGCAGTTGTCTAG 2052 0.4469 MASGSGSGSGSVGCSSDSRIENLICATKSLKVSLEKSKTVGLGLEKAGPRLDEIRVRLPWLESAVRPIRAEKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRIDLPGYLSVLKRLEEALRFLGDNCGLAIQWLDDIVEYLEDNSVADQVYLKNLKRELESLKESQNGDLDGGLLDAALDKLENEFRLLLTENSVPLPMSSNSLGDQPCIAPSPLPVSVVHKLQAILGRLRANDRLDKCVSIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEVYIAQWGKHLEFAVKHLFEAEYKLCNDVFERLGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGDACVEIQNLTRELIKSVIDGAAEIFWELLVQVELQRQSPPPPDGNVPRLVSFITDYSNKLLGDDYKPILTQVLIIHRSWKRQSFQEKLLVNEILNILKAIEANLDTWIKAYDDPMLSNFFAMNNHWHLFKHLKGTKLGDLLGDSWLKEHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYSKQSGWIMVERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQEASSNKYAKYTVQKLEEMLLCLYRPKPARHGSLRSPQLSGKYGNGIPDLRRTASAVV 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04965 683 FunFam Exocyst subunit Exo70 family protein 142 655 - -
Vivi4g04965 683 Gene3D Exocyst complex component Exo70 90 656 - -
Vivi4g04965 683 SUPERFAMILY Cullin repeat-like 92 649 IPR016159 -
Vivi4g04965 683 PANTHER EXOCYST COMPLEX PROTEIN EXO70 88 645 IPR004140 GO:0000145|GO:0006887
Vivi4g04965 683 Pfam Exo70 exocyst complex subunit 290 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04965 Vivi-Chr4 179818809 179821917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04965 17 683 EXO70 exocyst subunit family AT4G31540 74.118 0.0 1033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04965 K07195 - gmx:100796139 1174.84