Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04957 ATGGCAGTGGAACTCATGGGGTTCCCAAAATTAGATGAACAAAAAGCCATCCAAGAGGCTGCATCAGAAGGTCTCAAAGGCATGGAACACCTGATCCTAACCCTTTCTCATCAACCTACTCAATTAAACACTCAACTCACCGATCTCACCGTCTCCAAGTTCAAAAAACTCATCTCTTTACTCAACCGAACCGGCCACGCCCGGTTCAGACGAGGCCCGGTTCAAACCCCACCGGTTCAACTTCAACCCACACTTTCTTCATCTTCTCTTCCTCCTCCTCCTCAACCGAAGCAGTTTCCTTCTCCGCCACCGTCACTGTCACCGCCCCTCGCACCGACACCGATCTCCATCCGTCACGCGCCGCCCACCTTTCCCCAACCGCAACACCACAGCCTCACGCTAGATTTCACAAAACCAAACGACGTCGTTTTAAGCTCAAACGCGAAAAACTCCGTCGTTGAACTTGAATTCTTGAAAGACACAGCAACGTTCAGCGTTTCTTCAACTTCCTCTTTCATGTCATCCGCCATCACCGGCGACGGTAGCGTCAACGGCAAACAAGGATCCTCGATCTTCCTCAATCCAGCAGCAACACCAGCTATCTCCGGAGGAAAACCGCCTCTCTCGTCAGCACCGTCAAAGAAACGATGCCACGATCACGGCGAACACTCCGACGATGTCTCCGGCTCAAACAAGTGCCACTGTGTCAAACGAAGGAAAAATAGGGTGAAGAGAACTGTGAGAGTACCGGCGATAAGTTCAAAGACAGCCGATATACCGCCAGACGAGTATTCGTGGAGAAAATATGGTCAGAAACCGATTAAGGGTTCACCGTATCCAAGAGGTTATTACAAGTGTAGTACTGTGAGAGGGTGTCCAGCGAGGAAACACGTGGAGCGTGCACCGGATGATCCAACGATGCTGATTGTAACGTACGAAGGGGAGCACAGACACGCGATTCAAGCCGCGATGCAGGAGAACGCAGCCGGGATTGTGGGTTTGGTATTCGAGTCAACGTAA 1020 0.5127 MAVELMGFPKLDEQKAIQEAASEGLKGMEHLILTLSHQPTQLNTQLTDLTVSKFKKLISLLNRTGHARFRRGPVQTPPVQLQPTLSSSSLPPPPQPKQFPSPPPSLSPPLAPTPISIRHAPPTFPQPQHHSLTLDFTKPNDVVLSSNAKNSVVELEFLKDTATFSVSSTSSFMSSAITGDGSVNGKQGSSIFLNPAATPAISGGKPPLSSAPSKKRCHDHGEHSDDVSGSNKCHCVKRRKNRVKRTVRVPAISSKTADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPTMLIVTYEGEHRHAIQAAMQENAAGIVGLVFEST 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04957 339 Pfam Plant zinc cluster domain 214 258 IPR018872 -
Vivi4g04957 339 Pfam WRKY DNA -binding domain 262 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g04957 339 MobiDBLite consensus disorder prediction 68 133 - -
Vivi4g04957 339 Gene3D WRKY domain 243 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi4g04957 339 MobiDBLite consensus disorder prediction 212 232 - -
Vivi4g04957 339 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 324 IPR044810 GO:0003700
Vivi4g04957 339 SMART WRKY_cls 260 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g04957 339 SUPERFAMILY WRKY DNA-binding domain 256 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi4g04957 339 ProSiteProfiles WRKY domain profile. 255 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi4g04957 339 MobiDBLite consensus disorder prediction 87 121 - -
Vivi4g04957 339 MobiDBLite consensus disorder prediction 198 232 - -
Vivi4g04957 339 FunFam WRKY transcription factor 65 244 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04957 Vivi-Chr4 179692361 179694066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04957 1 338 WRKY Transcription Factor Family AT2G24570 58.333 4.31e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi4g04957 WRKY 9.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04957 - - tpra:123902288 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04957 4 179692361 179694066 Vivi4g04957 4 179692361 179694066 ECH