Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04932 ATGGAACCAAAGTGGGGAACCATCCTAACGCCGTCATCCATTTTCTCCGGCTTCGAAGATCTCAAATGGATCACGGAGTTCGATCACGAACCTTTCACAAAGCGTCCAGTTACAGTCGAAACGGAAACCGATTCAGCGAACGACATCGACGTGAAACCGTTTAAAGTGGATCCGTTCACCGGCGTCGGCGATGTTTGCTCCGGCATCATCGCTGATGCCGCCGATTTTCAAAATCTGGATACGGTAACTTCATTTTCAACATGTGGTGAACCTACAAATAATACTTTTGTATCCTCCCAAAACCTCACTCCCAAGCATTCTACCATCACTGCAACAATTGATTCTCAATCATCCATTTCTGCTACCGTTACGAGCCCAGTCTCAGCTAATAAACCAAGCAATAGAGAAAATCAAACCAAAGGAGTAACTACAACAAGTGGTTCCTCACGTGATCCGTCTGATGTAGATGATGAAGCTGGTCCTTGTGAACAAAGCACAAACCCTATTGATATGAAGCGCCTTAGAAGGCAGGTGTCGAATCGTGATTCTGCGAGAAGGTCTAGAAGAAGAAAACAAGCACATTTGGCGGATCTTGAGGTTCAGGTTGAACAACTGAGGCTGGAAAATGCAGGCCTATTTAAACAGCTTACTGATGCCAGTCAACAATTTCGTGATGCTAACACAAATAACCGAGTTTTAAAATCAGATGTTGAAGCTTTGAGGGCTAAGGTGAAGTTAGCAGAGGATATGGTCTCTAGGGGCACTCTCCCCACTTTTAACAACCAGCTTCTCCAAAATCATAATCAATTGAGCACTACTCCACCACAAATCAACACTAATAGTCTCCGCTGCATGGCGCATGTTTCGCCCACCATCACCATCCATGGAAATGATGCTTCATATGGTGTTACTGGACAGAATTCGACTATTGGACTTGGAGACTTTGATATATCTTGCAGTGATTTCAACAATGGAGTCAATAATGATGCTGTGAGCTCTTTGACTAGCATATGGCAGTAA 1020 0.4412 MEPKWGTILTPSSIFSGFEDLKWITEFDHEPFTKRPVTVETETDSANDIDVKPFKVDPFTGVGDVCSGIIADAADFQNLDTVTSFSTCGEPTNNTFVSSQNLTPKHSTITATIDSQSSISATVTSPVSANKPSNRENQTKGVTTTSGSSRDPSDVDDEAGPCEQSTNPIDMKRLRRQVSNRDSARRSRRRKQAHLADLEVQVEQLRLENAGLFKQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEDMVSRGTLPTFNNQLLQNHNQLSTTPPQINTNSLRCMAHVSPTITIHGNDASYGVTGQNSTIGLGDFDISCSDFNNGVNNDAVSSLTSIWQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04932 339 SMART brlzneu 168 232 IPR004827 GO:0003700|GO:0006355
Vivi4g04932 339 Coils Coil 188 250 - -
Vivi4g04932 339 MobiDBLite consensus disorder prediction 115 170 - -
Vivi4g04932 339 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 175 190 IPR004827 GO:0003700|GO:0006355
Vivi4g04932 339 PANTHER BASIC LEUCINE ZIPPER 63 93 309 - -
Vivi4g04932 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 170 233 IPR004827 GO:0003700|GO:0006355
Vivi4g04932 339 MobiDBLite consensus disorder prediction 115 150 - -
Vivi4g04932 339 FunFam BZIP transcription factor 170 221 - -
Vivi4g04932 339 SUPERFAMILY Leucine zipper domain 172 222 IPR046347 GO:0003700|GO:0006355
Vivi4g04932 339 Pfam bZIP transcription factor 171 219 IPR004827 GO:0003700|GO:0006355
Vivi4g04932 339 Gene3D - 171 228 - -
Vivi4g04932 339 CDD bZIP_plant_GBF1 190 224 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04932 Vivi-Chr4 179352875 179357433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04932 114 338 bZIP Transcription Factor Family AT5G24800 50.215 2.08e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi4g04932 bZIP_1 8.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04932 K25784 - gmx:778193 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00038 3 516547 520644 Vivi4g04932 4 179352875 179357433 PCT