Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04929 ATGCCTCGTGGAACTCTAGAAGTGATTCTCATTGGAGCAAAAGGCCTTCATGACACTGATTTTTTCAGTAAGTATTTCAAGAAAATGGATCCCTATGTGATTCTGACTTATAAAGCTCAGGAGCACATAAGCAGTGTAGCCAAAAATGCAGGATCTAATCCTCGTTGGAATGAAAGCTTTCTTTTCACTGTTGCTGACAATGTTGCTGAACTTAATTTGAGGCTTATGGATAAAGATAAATTTACCAGAGATGATTTTCTTGGTGAAACAATAATTAATTTGGGACCAGTTCTTGAGGAATATAGTGTGCCAGAAACTTCTTATAATGTTGTGAAAAATCAGAATTACCGTGGAGAAGTTCGTTTGGCTCTCACTTTTCATCCAGAGGGTGGGTTTTACTGA 402 0.3756 MPRGTLEVILIGAKGLHDTDFFSKYFKKMDPYVILTYKAQEHISSVAKNAGSNPRWNESFLFTVADNVAELNLRLMDKDKFTRDDFLGETIINLGPVLEEYSVPETSYNVVKNQNYRGEVRLALTFHPEGGFY 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04929 133 Gene3D C2 domain 2 129 IPR035892 -
Vivi4g04929 133 PANTHER C2 DOMAIN-CONTAINING 1 127 - -
Vivi4g04929 133 SMART C2_3c 5 106 IPR000008 -
Vivi4g04929 133 Pfam C2 domain 4 107 IPR000008 -
Vivi4g04929 133 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 130 IPR035892 -
Vivi4g04929 133 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04929 Vivi-Chr4 179319270 179320319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04929 4 98 C2H2 Transcription Factor Family AT4G21160 33.684 1.52e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04929 - - gmx:100814819 183.726