Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi4g04929 | ATGCCTCGTGGAACTCTAGAAGTGATTCTCATTGGAGCAAAAGGCCTTCATGACACTGATTTTTTCAGTAAGTATTTCAAGAAAATGGATCCCTATGTGATTCTGACTTATAAAGCTCAGGAGCACATAAGCAGTGTAGCCAAAAATGCAGGATCTAATCCTCGTTGGAATGAAAGCTTTCTTTTCACTGTTGCTGACAATGTTGCTGAACTTAATTTGAGGCTTATGGATAAAGATAAATTTACCAGAGATGATTTTCTTGGTGAAACAATAATTAATTTGGGACCAGTTCTTGAGGAATATAGTGTGCCAGAAACTTCTTATAATGTTGTGAAAAATCAGAATTACCGTGGAGAAGTTCGTTTGGCTCTCACTTTTCATCCAGAGGGTGGGTTTTACTGA | 402 | 0.3756 | MPRGTLEVILIGAKGLHDTDFFSKYFKKMDPYVILTYKAQEHISSVAKNAGSNPRWNESFLFTVADNVAELNLRLMDKDKFTRDDFLGETIINLGPVLEEYSVPETSYNVVKNQNYRGEVRLALTFHPEGGFY | 133 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi4g04929 | 133 | Gene3D | C2 domain | 2 | 129 | IPR035892 | - | |
Vivi4g04929 | 133 | PANTHER | C2 DOMAIN-CONTAINING | 1 | 127 | - | - | |
Vivi4g04929 | 133 | SMART | C2_3c | 5 | 106 | IPR000008 | - | |
Vivi4g04929 | 133 | Pfam | C2 domain | 4 | 107 | IPR000008 | - | |
Vivi4g04929 | 133 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 1 | 130 | IPR035892 | - | |
Vivi4g04929 | 133 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi4g04929 | Vivi-Chr4 | 179319270 | 179320319 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi4g04929 | 4 | 98 | C2H2 Transcription Factor Family | AT4G21160 | 33.684 | 1.52e-11 | 58.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi4g04929 | - | - | gmx:100814819 | 183.726 |