Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04923 ATGGTGGAGAAGACCGGCGCCGGTAGGAAGGAAGAGGTGGTTACCAAAGAGTACACCATTAACCTCCATAAACGCCTCCATGAATGCACATTTAAGAAGAAAGCTCCAAAAGCCATCAAGGAGATAAGGAAGTTTGCCCAAAAAGCAATGGGAACCAATGATGTTCGTTTTGACGACAAGTTGAACAAGGCTATATGGAGCCAGGGAATTAGAAGTGTCCCTAGAAGAATCAAGGTACGGATTTCTCGCAAGAGAAATGATGACGAGGATGCGAAGGAAGAGCTCTACTCTCTTGTTACTGTTGTTGAAATCCCCAAGGAATAG 324 0.4475 MVEKTGAGRKEEVVTKEYTINLHKRLHECTFKKKAPKAIKEIRKFAQKAMGTNDVRFDDKLNKAIWSQGIRSVPRRIKVRISRKRNDDEDAKEELYSLVTVVEIPKE 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04923 107 PANTHER 60S RIBOSOMAL PROTEIN L31 3 104 IPR000054 GO:0003735|GO:0005840|GO:0006412
Vivi4g04923 107 SUPERFAMILY Ribosomal protein L31e 12 93 IPR023621 -
Vivi4g04923 107 Gene3D - 2 107 IPR023621 -
Vivi4g04923 107 CDD Ribosomal_L31e 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Vivi4g04923 107 SMART Ribosomal_L31e_2 11 94 IPR000054 GO:0003735|GO:0005840|GO:0006412
Vivi4g04923 107 FunFam 60S ribosomal protein L31 7 107 - -
Vivi4g04923 107 Pfam Ribosomal protein L31e 12 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04923 Vivi-Chr4 179212256 179213110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04923 6 107 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 80.392 3.31e-57 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04923 K02910 - gmx:100306335 191.045