Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04916 ATGGTTGTCATAGATATCGCGCTGGCTCAAGAGAATGACTGTGAGTTTCTTAGGTTTATAAAAAGTGAACATGACCGTATTCAACTTTATGTGACCTATGAGGGTAATCCTAATGACGCTCCGATAAAAGCTAGTTTAGAGATTGCTCAGAAATATGTTCAAGGGAATAAAAAGATTAAGATAATACCAAGGGTTCCGTTTGACTTCGCTGCCACTTCATCCAGTCAGCTTGTTCCTGTTTTGACAAGCTCTACGAAGCATGCTGCTGGTGCATCCAGGTTCTCTGAAATGGATTCAGATGCTCAAGTCATTAAGAATGAAGATCTTGAAGAGTTAAAGGAACTGGGTTCTGATACATTTGGGACTGTTTATCATGGAAAATGGAGAGGAACAGATGTTGCTATCAAGAGAATAAAGAAGAGTTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGGATCTGAGAAAGAAGCTAGCTAGGATGGAATACGGTGGTGGGATAGTGGGCGACGGCGGTGTATTTGGGACTATGCTAGTGAGATGGTGGATCGGGCCGAGGGCGAGTCAAGGTCCATCAACTTTGGTGAAAGAGAGATTAGTAGTTGATGTTGGTTACTTAAAAGAGTACACAAAGAACTCTTCCAACAACGTTCTTATTCACATATGGGTGCCTGTTCTAAGGAGGAGATCAGCAATTCAATATCTGCAGCAGGATTCCAGTTCATCTGTTCCGATTTATGTGAATCCAAACATGAATGTTCATAACGAGTATCCGCGACATCAGCAACAACAGCAACAGTATGGTTCTCTTTTAGCATTTCCTGTGTTCGAAAGAGGAAGTGGAACATGTCTAGGTGTCATTGAGTTTGTTATCGCCAATCAAAACCTCATCAATTATCGTCCACAACTCGATCATCTCTCCAATGCTCTTGAGGCTGTTGATTTTAGAAGTAGCCACAACATGAATATTCCACCAGCAGTAAAGGTTTTTGAGGAGTTGTACGAAGCAGCGGTGAATGAGATCGTAGAGGTGTTGGCGTCTGTATGCAAGACTCACAATTTGCCACTAGCGCTAACATGGGCTCCTTGCATACAACAACAAGGAGGAGGAAAAGGTACTACCGGTGGTGGTGGATGCAGTGTTTCGATTACAGTTCCAACGGATCAGATGAACAATAATAATCATATGATGATGAGTTGCATATCGACTGTTGATTCAGCTTGTTATGTTGGTGACATGGAGATGTTAAGATTTCAAGATCAAATGCAAATGGTTGAAGAGGATAAAGACATAGAAATGTTGCCAAAACAAAAATAA 1320 0.4167 MVVIDIALAQENDCEFLRFIKSEHDRIQLYVTYEGNPNDAPIKASLEIAQKYVQGNKKIKIIPRVPFDFAATSSSQLVPVLTSSTKHAAGASRFSEMDSDAQVIKNEDLEELKELGSDTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLDLRKKLARMEYGGGIVGDGGVFGTMLVRWWIGPRASQGPSTLVKERLVVDVGYLKEYTKNSSNNVLIHIWVPVLRRRSAIQYLQQDSSSSVPIYVNPNMNVHNEYPRHQQQQQQYGSLLAFPVFERGSGTCLGVIEFVIANQNLINYRPQLDHLSNALEAVDFRSSHNMNIPPAVKVFEELYEAAVNEIVEVLASVCKTHNLPLALTWAPCIQQQGGGKGTTGGGGCSVSITVPTDQMNNNNHMMMSCISTVDSACYVGDMEMLRFQDQMQMVEEDKDIEMLPKQK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04916 439 SUPERFAMILY Protein kinase-like (PK-like) 91 148 IPR011009 -
Vivi4g04916 439 Gene3D Phosphorylase Kinase; domain 1 85 163 - -
Vivi4g04916 439 PANTHER PROTEIN NLP8 256 423 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04916 Vivi-Chr4 179110944 179113516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04916 181 419 NLP Transcription Factor Family AT4G35270 37.456 1.51e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04916 - - vvo:131619491 482.256