Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04915 ATGTCATCCTCATCATCAATAACATTGAAAGGTTGTTCCACTGTGACACCAATGGAACCAACATGGAATGGTTGTTTACCATTAACGGAATTTGATCAACTTGGAATCACAATGTACACTCCCCTTCTTCTCTATTACCGCCCACCACAAAATTGGCTTAACCCCCCTACTAAAATTGCCACCACTTTGAAAGACTCTTTAAGTAGAGTTCTTGTACATTTTTATCCATTTGCTGGTCGTTTAAGGTCGAAAGACAATACTCGTTTTGAACTAGAATGCAACGCAAAGGGTGTTCAGTTCATTGAAGCAGAATCGGCCTCTTCAACATTACCTGATCTTGGTGACTTTTCTTCTTCAGACAATTATTGTAGTTACCTTTTCCCACACATTGACTACACGGTCCCAATTCAAGATCGTCCTTTGTTATTTGTCCAACTCACGAATTTCAAATGCGGTGACATTAGCATTAGTTTGTTATTGTCACATGTGATTGTTGATGGACAAAGTGCGGTACATTTCATTGATGAGTGGGCTCGGGTAGCACGTGAAGAATCTTTAAAAAGGGTTCCATTTCTTGATAGAAACATCTTATATAATAAGGAACCATACAATGGTGTAAAGGAGTGGAAGTTTGCTAAACCTCCGCTTTTGTTGGAAAATTCAGATGGTAAAGAAGAAGAAAGAAAGAATAAAACAACGGTTGCTATAATCCAAGTAAGTAAAGCACAAATTGAAAGGTTGAGAAAAATATCGAATGAGAGTTGGAATAAATCTAGTAATGAACGAAGTTATACAGTCTATGAAACGGTAACTGGTCATGTTTGGAGGAGTGCATGTAAAGCTAGAGGGCTTAAATTTGACCAACCAACCGTATTCGGTGTCGTTGTTGATTTCAGAAGTCGTGTGAAACCTAATTTACCAAAAAAGTATTTCGGAAATGCAATTGTGAATGTGGTGGCTACTAGTCTTGCAGGTGATTTGATGTCCAAGCCATTAGGATATGCTTCGAGTAGGATAAAGGAAGCAATTGAGAAGGTGAATGATGAGTATGTGAGATTGACGTTGAGTGATTATCTTAAGAGAGACTATGATCGGACTATGATGAGTGGGTACACCGTGCCATTTTATCGGAATCCTAATTTAGGAGCAGTTAGTTGGATGATGTTGTCATTTACCAAATTTGATTTTGGATGGGGGAAGGAGGTTTATATGATACCGGGAATACATACTATACTTGAAGGAGAAATATATATTATTCCTAATTCTCAAGTTGATGGATCTTTGGTGCTTTTTATTTGTTTGCAAGAGATCTATATGAATGCCTTCAAAAGACATTTTAATGAAGGTGTTGTTGAGCTGGACTCATTCTCAAAGTTGTAA 1380 0.3761 MSSSSSITLKGCSTVTPMEPTWNGCLPLTEFDQLGITMYTPLLLYYRPPQNWLNPPTKIATTLKDSLSRVLVHFYPFAGRLRSKDNTRFELECNAKGVQFIEAESASSTLPDLGDFSSSDNYCSYLFPHIDYTVPIQDRPLLFVQLTNFKCGDISISLLLSHVIVDGQSAVHFIDEWARVAREESLKRVPFLDRNILYNKEPYNGVKEWKFAKPPLLLENSDGKEEERKNKTTVAIIQVSKAQIERLRKISNESWNKSSNERSYTVYETVTGHVWRSACKARGLKFDQPTVFGVVVDFRSRVKPNLPKKYFGNAIVNVVATSLAGDLMSKPLGYASSRIKEAIEKVNDEYVRLTLSDYLKRDYDRTMMSGYTVPFYRNPNLGAVSWMMLSFTKFDFGWGKEVYMIPGIHTILEGEIYIIPNSQVDGSLVLFICLQEIYMNAFKRHFNEGVVELDSFSKL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04915 459 Gene3D - 221 448 IPR023213 -
Vivi4g04915 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 443 - -
Vivi4g04915 459 Gene3D - 3 210 IPR023213 -
Vivi4g04915 459 Pfam Transferase family 6 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04915 Vivi-Chr4 179078894 179080788 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04915 8 448 Monolignol Biosynthesis Gene Families AT5G48930 35.955 6.32e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04915 K13065 - qsu:112033159 448.743