Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04914 ATGTCGTCGTCATCATCATCATCAATAACATTGAAAGGTTGTTACACTGTGATACCAATGGAACCAACATGGAATGGTTGTTTACCATTAACTGAATTTGATCAACTTGATATCACATTGTACGTTTCCCTTCTTCTCTATTACCGTCCACCACAAAATTGGCTTAATCCCTCTACTAAAATTGCCACCACTTTGAAAGACTCACTAAGTAGAGTCCTCGTACATTTTTATCCATTGGCTGGTCGTTTACGATCGAAAGGCAATACTCGTTTTGAACTAGAATGCAACGCAAAGGGTGTTCAGTTCATTGAAGCAGAATCGGCCTCTTCAACATTACCTGATCTTGGTGACTTTTCTTCTTCAGACAATTATTGTAGTTACCTTTACCCACACATTGACTACACAGTCCCAATTCAAGATCGTCCTTTGTTATTTGTCCAACTCACGAATTTCGAAAGCGGTGACATTAGCATTAGTTTGTCAATGTCACATGCAATTGCTGATGGACAAAGTGGGATACATTTCATTGATGAGTGGGCTCGGGTAGCACGCGGAGAATCTTTAAAAAGGGTTCCGTTCCTTGATAGAAACATCTTATATAATAAGGAACCATACAATGGTGTAAAGGAGTGGAAGTTTGTTAAACCTCCGCTTTTGTTGGAAAATTCAGATAGTAAAGATGAAGAAAGAAAGAATAAAACAACGGTTGCTATAATCCAAGTAAGTAAAGCACAAATTGAAAGGTTGACAAAAATATCGAATGAGAGTTGGAATAAATCTAGTAATGAACGAAGTTATACAGTTTTTGAAACGATAACTGGCCATGTTTGGAGGAGTGCATGTAAAGCTAGAGGGCTTAAAATTGACCAACCAACCGTATTCGGTTTCGTTGTTGATTTTAGAAGTCGTGTGAAACCTAGTTTACCAAAAAAGTATTTCGGAAATGCGATTGTGAATGTGGTGGCTACTAGTCTTGCAGGTGATTTGATGTCCAAGCCATTAGGATATGCTTCACGTAGGATAAGGGAAGCAATTGAGAAGGTGAATGATAAGTATGTGAGATTGACGTTGAGTGATTATCTTAAGAAAGACTATGATCGGACTATGATGCGTCGGTACACTTTGCCGCCATTTTTTCGGAATCCTAATTTAGGAGCAGTTAGTTGGATGATGTTATCATTTACCAAATTTGATTTTGGATGGGGAAAGGAGGTTTATATGATACCGGGAATTCATACTTTACTTGAAGGAGAAACATTCATTATTCCTAATTCTCAAGTTGATGGATCTTTGGTGCTTTTTACTTGTTTGCAAGAGATCTATATGGATGCCTTCAAAAGACATTTTAGTGAAGGAGTTGTTGAGTTGGACTCTCTCTCAAAGTTGTAA 1389 0.378 MSSSSSSSITLKGCYTVIPMEPTWNGCLPLTEFDQLDITLYVSLLLYYRPPQNWLNPSTKIATTLKDSLSRVLVHFYPLAGRLRSKGNTRFELECNAKGVQFIEAESASSTLPDLGDFSSSDNYCSYLYPHIDYTVPIQDRPLLFVQLTNFESGDISISLSMSHAIADGQSGIHFIDEWARVARGESLKRVPFLDRNILYNKEPYNGVKEWKFVKPPLLLENSDSKDEERKNKTTVAIIQVSKAQIERLTKISNESWNKSSNERSYTVFETITGHVWRSACKARGLKIDQPTVFGFVVDFRSRVKPSLPKKYFGNAIVNVVATSLAGDLMSKPLGYASRRIREAIEKVNDKYVRLTLSDYLKKDYDRTMMRRYTLPPFFRNPNLGAVSWMMLSFTKFDFGWGKEVYMIPGIHTLLEGETFIIPNSQVDGSLVLFTCLQEIYMDAFKRHFSEGVVELDSLSKL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04914 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 445 - -
Vivi4g04914 462 Gene3D - 222 451 IPR023213 -
Vivi4g04914 462 SUPERFAMILY CoA-dependent acyltransferases 27 185 - -
Vivi4g04914 462 Pfam Transferase family 8 450 - -
Vivi4g04914 462 Gene3D - 5 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04914 Vivi-Chr4 179069810 179071439 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04914 16 451 Monolignol Biosynthesis Gene Families AT5G48930 35.388 8.76e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04914 K13065 - rcu:8273365 444.121