Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04905 ATGTCATCCTCATCATCAATAACAGTGAAAGGTTGTTACACTGTGACACCAATGGAACCAACATGGAATGGTTATTTACCATTAACCGAATTTGATCAAATTGATATCACATCATACGCTCCACTTCTTTTCTATTACCGCCCACCACGAAATTGGCTTACTCCCCCTACTAAAATTGCCGCCACTTTGAAAGAATCACTAAGCAGAGTCTTGATACATTTTTATCCATTTGCAGGTCGTTTACGATCAACAGATAATAACCGTTTTGAATTAGAATGCAATGCAAAGGGTGTTCAGTTCATTGAAGCAGCAGAATCGACCTCTTCAGCATTATCCGATCTTGGTGACTTTTCTTGTTCAAACAATTATTGTAGTTATCTTTTCCCGCAAGTTGACTACACTCTCCCAATACCAGACCGTCCTTTGCTAATAGTCCAACTCACGCATTTCAAATGTGGTGACATTAGCATTAGTTTGTTATTGTCACATGTGATTACTGATGGACAAAGTGCGACACATTTCATTGATGAGTGGGCTCGAGTAGCACGCGGAGAATCTTTAAAAAGGGTTCCGTTTCTAGATAGAAACATCTTACGTAATAAGGAACCATGCAATGGTGTAAATGAGTGGAAGTTTGCTAAACCTCCGCTTTTGTTGGAAAATTCAGAAAGTAATCTTGACGAAAGAAAGAAAAAAACAACGGTTGCTATAATCCAACTAAGCAAAGCACAAATCGAAAGGTTGAGAAAAATATCTAATGAGAGTTGGAATAAATCCAGTAATGAACGAAGTTATACAATTTATGAAACGATAACTGGTCATATTTGGAGGAGTGCATGTAAAGCTAGAGGGCTTAAAATTGACCAACCAACTGTGTTTGGTATCGTTGTTAATTTCAAAAGTCGTGTGAAACCTAGTTTACCAAAAACGTATTTCGGAAATGCGATAGTGAATGTGGTGGCTACTAGTCTTGCAGGTGATTTGATGTCTAAGCCATTAGGATATGCTTCGAGTAGGATAAAGGAAGCAATTGAGAAGGTGAATGATGAATATGTGAGATTGACGTTGACTGAGTACATTAAGAAAGACTATGATCGGACTAAGATACGTTATGACACTGTGCCGCCATTTTATCGGAATCCCAATTTAGGAGCAGTTAGTTTGATGATGTTTTCATTTGCCAACTTTGATTTTGGATGGGGGAAGGAGCTTTATGTGATTCCGGGAATACATATTATACGTGAAGGAGAAACATTCATTCTTCCTAGTTCTCAAGTTGATGGATCTTTGGTGCTTTTGATTTGTTTGCAAGAGATCTATATGAATGCCTTTAAAAGACACTTTAATGAAGGTGTTGTTGAGTTGGACTCTCTCTCAAAGTTGTAA 1386 0.3781 MSSSSSITVKGCYTVTPMEPTWNGYLPLTEFDQIDITSYAPLLFYYRPPRNWLTPPTKIAATLKESLSRVLIHFYPFAGRLRSTDNNRFELECNAKGVQFIEAAESTSSALSDLGDFSCSNNYCSYLFPQVDYTLPIPDRPLLIVQLTHFKCGDISISLLLSHVITDGQSATHFIDEWARVARGESLKRVPFLDRNILRNKEPCNGVNEWKFAKPPLLLENSESNLDERKKKTTVAIIQLSKAQIERLRKISNESWNKSSNERSYTIYETITGHIWRSACKARGLKIDQPTVFGIVVNFKSRVKPSLPKTYFGNAIVNVVATSLAGDLMSKPLGYASSRIKEAIEKVNDEYVRLTLTEYIKKDYDRTKIRYDTVPPFYRNPNLGAVSLMMFSFANFDFGWGKELYVIPGIHIIREGETFILPSSQVDGSLVLLICLQEIYMNAFKRHFNEGVVELDSLSKL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04905 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 445 - -
Vivi4g04905 461 Gene3D - 222 450 IPR023213 -
Vivi4g04905 461 Gene3D - 2 211 IPR023213 -
Vivi4g04905 461 Pfam Transferase family 6 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04905 Vivi-Chr4 178917246 178918762 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04905 14 450 Monolignol Biosynthesis Gene Families AT5G48930 36.569 4.32e-88 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04905 K13065 - rcu:8273365 441.81