Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04866 ATGTCGGAATTTGATTTATTTGTAGAGGGAGATCTGTTCAAAGCGCCTGAGACGATTATGGAAGAACCGGAGATGGACCTTGATCCTATGCAAGCCATGTCAATGATATCATGTGGCGAAGATATGTCGTCTCAGGGTCTAAAATCTTCGGATATTGAAAATGTACTTCAAAATGAACAGCTTTTAAGTGAGGTATACTATGAGTGCAAAAAAGATCTCTTGGAAAAGGCAAATATAGAGTCACCTCTATCTGAAATTCTCGAAATCAAGATTCCTGCTCTGAACATCGAGGAGAATACGGTTCAAGAAAACAAACCAATTCCTGATGTACTATTACCAAAGAGTGTTAGTTCGGGAAGTTTGAGTTCAATGGATTGGATGCATGGAGCTGCAATGAAGCCTGCTTTCCTTGATTTCCCTGGAATCGATTTCAACGCGGTTTATGGCATGCGGAGGGCGTTTAGTGAAGGTGATATAAAGACTCTTGGAAATGGTAACATCAGTGTTGGCCAATCTACTCTCGAGAGGCCTTTTCTTCACACCAACTGTACGAGTGAGCAACGTCAAGAAAAACTCTCTAGATATAGGAATAAGAAGACAAGGAGAAACTTTGGAAGGAAAATAAAGTATGCTTGCAGGAAAGCGCTGGCTGACAGTCAACCAAGAATCCGTGGAAGATTCGCGAAAACGGAGGAACTTGATGTCAAGAGGCAATGA 717 0.4156 MSEFDLFVEGDLFKAPETIMEEPEMDLDPMQAMSMISCGEDMSSQGLKSSDIENVLQNEQLLSEVYYECKKDLLEKANIESPLSEILEIKIPALNIEENTVQENKPIPDVLLPKSVSSGSLSSMDWMHGAAMKPAFLDFPGIDFNAVYGMRRAFSEGDIKTLGNGNISVGQSTLERPFLHTNCTSEQRQEKLSRYRNKKTRRNFGRKIKYACRKALADSQPRIRGRFAKTEELDVKRQ 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04866 238 ProSiteProfiles CCT domain profile. 188 230 IPR010402 GO:0005515
Vivi4g04866 238 Pfam CCT motif 188 230 IPR010402 GO:0005515
Vivi4g04866 238 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 123 231 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04866 Vivi-Chr4 178185934 178188885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04866 163 234 C2C2-CO-like Transcription Factor Family AT5G57660 43.243 9.89e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi4g04866 CCT 1.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04866 - - aprc:113853022 362.844