Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04863 ATGTTTGCAGAAACTGGCCTTCTCTTCCCTTACCTACAGAATTACTCCCATGAGTTTCAACAACTTGAAGAGTACTGCATGACTCAAAAATCCAATGCTTCAATGAGTGACCTTGTTCAATCATCTGCAATGTCGGAATTTGATTTATTTGTAGAGGGAGATCTGTTCAAAGCGCCTGAGACGATTATGGAAGAACCGGAGATGGACCTTGATCCTATGCAAGCCATGTCAATGATATCTTGTGGCGAAGATATGTCGTCTCAGGGTCTAAAATCTTCTGATATTGAAAATGTACTTCAAAATGAACAGCTTTTAAGTGAGGTATACTATGAGTGCAAAAAAGATCTCTTGGAAAAGGCAAATATAGAGTCACCTCTATCTGAAATTCTCGAAATCAAGATTCCTGCTCTGAACATCGAGGAGAATTCGGTTCAAGAAAACAAACCGATTCCTGATGTACTATTACCAAAGAGTGTTAGTTCGGGAAGTTTGAGTTCAATGGATTGGATGCATGGAGCTGCGATGAAGCCTGCTTTCCTTGATTTCCCTGGAATCGATTTCAATGCGGTTTATGGCATGCGGAGGGCGTTTAGTGAAGGTGATATAAAGACTCTTGGAAACGGTAACATGAGTGTTGGCCAATCTACTCTCGAGAGGCCTTTTCTTCACACCAACTGTACGAGTGAGCAACGCCAAGAAAAACTCTCTAGATATAGGAATAAGAAGACAAGGAGAAACTTTGGGAGGAAAATAAAGTATGCTTGCAGGAAGGCACTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTCGCGAAAACGGAGGAACTAGATGTCAAGAGGCAATGA 846 0.4161 MFAETGLLFPYLQNYSHEFQQLEEYCMTQKSNASMSDLVQSSAMSEFDLFVEGDLFKAPETIMEEPEMDLDPMQAMSMISCGEDMSSQGLKSSDIENVLQNEQLLSEVYYECKKDLLEKANIESPLSEILEIKIPALNIEENSVQENKPIPDVLLPKSVSSGSLSSMDWMHGAAMKPAFLDFPGIDFNAVYGMRRAFSEGDIKTLGNGNMSVGQSTLERPFLHTNCTSEQRQEKLSRYRNKKTRRNFGRKIKYACRKALADSQPRIRGRFAKTEELDVKRQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04863 281 Pfam CCT motif 231 273 IPR010402 GO:0005515
Vivi4g04863 281 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Vivi4g04863 281 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 163 274 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04863 Vivi-Chr4 178112097 178115377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04863 206 277 C2C2-CO-like Transcription Factor Family AT5G57660 43.243 7.20e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi4g04863 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04863 - - aprc:113853022 438.728