Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04852 ATGGATGTAGGTGGTGATGAAGAAGAGTTCAGGAGGTGTAGTATACAAGGTGGGTCTGGATGGCGGTGTAAAGAGAGAGCTTTACCTGGAAACCCTCAATGTGAAAAGCATCATTTGTATGCACTTAATAGAAAGAAAAATAGTAAGAAAAGTAGTTCTGGGAGGAAAAGAAAAGCTGAAGAAAGTTCAGAAAATGGGGTTGTTGAGGATGATGGTGGAGGTAAAGGGTTGTTTGATGGTGGTGATGATGGTGGTGGTGGGGTTTTTGTAGAAGGTGAAGTGAATGGTGGTGTTAATCTTGGTGTTGATTCTGGGAGTTTTAATCTCTGGCAACAAGGAGAAGGTCAACAGCTTGAGGTTTTTGGAGAGGGGAATGGGAATTTAGGTAAGTTTCTTGGGGATGGAGTTGAGTTTTTAGGTGGGTTTGTTGAGGATAGGAATGGTGTTGGTTTAGGTCAGCCATGGAGTAGTGTAGGTGTGTTTGGGAATGCTGGTGGGGTTTCTGGTGTTGTGAAAGAAGATCATGGAAACCGCGTTGATGGTGTTTGTCAAAATGACTCACTTGGTTTTCATTCTCAAGGAATTGATGGGTTGATTGGCGAAGAAGATGGAGCTGGGTTTGGGAATTTGTATGATAGGAGTTTTCAAGCACTTCTTAGTCAAGGGAAGGTTTGTGAGGAAGATGTGAATTTAATTGATGGTGCAACAGGTTTTCAAGGGTTGGATGGGGAAAGTGCTTATGATTTTAGAGGTGAGGTTGGTGAGGGTGTGGGAAATCTAAGTCAGCAAGATGGTAAATTCGGAGGTGAAAAAAATGTTGATAATGTATTAGAGGCTCCTAACTCTAATTCAAGTGACAAGATGAAAGCCATTGGTGTTGAAGAGGGAATGGAACTGTTACCAAGTGGAGGAGTTTCTACTAATGAAGAGGCAAAAGGTGAAGTTTTGAAGCCATTGACTAGGAGAGGAGGAAGACCTAAGGGTTCTAAGAATAAGAAGAAGAAAAGGGTTAGCTTAGCCGTGGACGGAGAAGCGGCTTGTGGAAGTGATAATGCAGGAACAATTGGGATGGATACGGTTGAAGTTTTAGAGAATGAAAAATCAGTGTTTTGTGGTAAGTCTGATGGAGAAGGTGTGGAAATGGGTGAGATTGCAAGGACAAGGGAGTGTAGTCAACCGGAAGATCAGAAGTGTACAGGGGAGATTGATTTGGCGGCTGGTTATGAAGTTGCTGGGGTTGGTGAGATTTCAAGACCGCTAAACAAAGAGAAGAATGTCGAGGAAGTTAGTAGTGAAGTTGCAGTTGAGATAGCAAGGCCTAAGAAGCGTGGCCGGCCAAAGAGTTCAGCCAATAAGAAGGTAACCTGTAGTGCTTCTAGCAAAGAAGGAGCTGGTGACATTACAACACAAGGTTCAGAAGAAAAAATGCTGATCGTTCCGTATCAGGAAGATGCAGATGAGTTTGCAAGCCTAACTAAGAAACTTGGTCCAGCATTGTCTACAAGGAATAAATTGAAAGGTATTGAATTTGAGGGTTATAAGAATCCAGAAATGTCTAGTAATGTTCGTCTTGAAGGTAATGATGGAACTGCAAGTGGTTTGGAGATTACTACACCGGCTCCTTTAAGTGAGACGGAAAAAGAGATGCCTTTTGAATCTGCCAAACATATTGAAAACTTAACTACGCCGCCAATAGTTAAGCGTGGTCGACCTAAGGGCTCAAAGAACAAGAAGAAAAGGCTAGCCGATCAGGAGCACATAGGCCATGGAGGTGACATCATTAAGCTAATTGGTATGGAAAATGACGAAGCCACTGCTGTTAGTGTCGGGGGTCAGGAATTGGTGGTTCAAACCCTTGGTCAAGATGAGGTTCAGAGTGTTAAACCAAAGATAGGTCGACCAAAGGGAGCTAAAAATAAGAAGAAAAATATTGATGGTGAAGCTGAAAACGAGTTACATAAGGAGAAAAAAAAGCGTGGTAGGCCTAAGGGTTCTGGCAAAAAGCAAAAGGAGACTGGAAATGAAAAGATAGCAAAGGGATTGGTGAGTGAATCTGGCGATGTCCATAAGATTGAAAGGCGTGGTAGACCAAAGGGTTCAGGCAAAAAGAAAATGGATAACAGTTCTCGATTGGATGCAGAGATTGAATGTGAGAAGAATACATGTGTTAATGGAATTTTGAGTACGACTATGCCACATAAACATATACATGAGGAATCCATTTTACTGCTAGAAGATCAAGTAAATAAGAAAGACGAGACAGATTTTGTTCTTGAGTGCTCAAAGGAATCTGGAATTGAAAAGGTAGCAAAGGGATTGGTGAGTGAATCCGACAATGTCCATAAGACTCAGGATGTCGAAGTGGGAGATATTTTTTATGAAAAGGAGGTGAAAGAAACTATAGATCATGGATTGGAACCTTCAGACATGATGAGTGACTGTGAGACCAAAAAGGAGCCAAGGAATTCAAGGTGCCATCAATGCTGGAAGAAGAGTAGAACTGGTCTTGTTGTTTGTTCCAAGTGCAAAAGAAAGAAATATTGCTATGAGTGCATTGCAAAATGGTACCAAGATAAAACTAGAGAGGAGATAGAGACTGCTTGTCCCTTTTGTCTGGATTATTGCAATTGCCGAATGTGCTTGAAGAAAGCTATATCTACGATGAATGGGAATGATGAAGCAGATAGAGATGTCAAATTACGGAAACTGTTTTACTTGCTCAAAAAAACTTTGCCATTACTCCAAGATATCCAACAGGAGCAGAGATATGAATTGGAAGTAGAAGCAAGCATACACGGTTCCCAGTTGGTGGAAGAGGAGAATATTCAGAAGGCAGAAGTTGATGAAGATGATCGAGTTTATTGTGACAACTGCAATACATCCATTGTCAATTTCCACAGAAGTTGTTCCAATCCTGATTGCCAGTATGATCTCTGTCTTACTTGTTGCACTGAACTAAGACTTGGAGTTCATTGTAAAGATATTCCTGCTAATGGTAATGACGAAATGGTCGATGCACCACCAGAATCTATTGCTTGGAGAGCAGAGACAAATGGTAGTATTACCTGCCCTCCGAAAGCTAGAGGAGGTTGCGGTATTGCTATCCTCTCATTGAGGCGCCTATTCGAAGCTAATTGGATTAACAAGTTGACTAGAGGTGTGGAGGAACTTACCGTCAAATATCAGCCACCTATTGTTGATCTTTCTTTAGGATGTTCAGAATGCCGTAGTTTTGTGGAAGACGTAGCTCAAAATTCTGCAAGGAAGGCAGCTTCAAGAGAAACCGGTTATGACAACTTTCTGTACTGTCCGGATGCTGTTGAAACCGGAGAAACAACATTTGAGCATTTCCAAAGACACTGGATAAGGGGTGAACCTGTTATTGTTAGGAATGCATATAAAAAAGCTAGTGGTCTTAGCTGGGACCCAATGGTGATGTGGAGAGCTTTTATGGGGGCAAGAAAAGTATTAAAAGAGGATGCCATTAATTTTAAAGCCATTGATTGCTTGGATTGGTGTGAGGTAGAAATTAACGCCTTTCAGTTCTTCAAAGGATACTTGGAAGGTCGTAGATATAGAAATGGATGGCCAGCTATGCTGAAGCTAAAGGATTGGCCTCCATCAAATTTTTTTGAAGAGTGTTTGCCAAGGCATGGTGCTGAGTTTATAGCGATGCTTCCTTTTAGTGATTATACACATCCCAAATCCGGTATTTTAAACCTGGCCACAAAGCTCCCTGCTGTTTTGAAGCCTGATTTGGGTCCTAAAACATACATTGCTTATGGAACTTCAGAGGAGTTGTGTAGAGGTGATTCTGTGACAAAATTACACTGTGACATTTCAGATGCGGTCAATATTCTGACACACAGTGCTGAAGTAAAGCCACCACCATGGCAATCCAGAATCATTAAAAAATTACGAAAGAAATATGAAGATGAAGATATGCGTGAGCTCTACAGCCAGGACAAAAAGGAAGTTAGTTTACCTAGAAAAAGAGGCAGAAAGCGTCGTGTAGGTTTTAACGTGGATCCTAAAACTTCTGAAAAAGAAGACCCTAGTGGTAGAGACTCACCCTTGCAAGGAAGTCAAGGAAAAGAAGAGAAACTTGATGAACAAGAATCCTCAGAACCCACCAAAATTAAATTCGATTTAAATGCCAGCGAGCAGGAAATCTCCGACTCACCAAATTTTCAGCAATTTGACCTCAATAGTCATGACTCCAGTTTCTTGGTTCCTGGAAACAATTGTGAGTCGATGCATTATGATAATGTGCAGCAAAGGTGCTCATCGCTAGGTGATGGATCTTATAAAGGAATTTCATCAGTGATTGATGATCAACCTTGTAGTGGAACACAAGAAACAAAAATTGTCAACAAATTAGATTCTTCAGAAGACTTCTGTTCGGATATCGAGACTAACAATGTAGATTCAGTCGAAAAGGATATTTTGAGTAATAATTTATGTCAAAATGATTTTCATTTGGGGACTCAAAATGGGAGTGCTGTATGGGACATATTCCGCAGGCATGATGTTCCCAAGCTAACAGAATATCTAAAGAAACACCATAGAGAGTTTCGCCACATGGTTAATCTTCCGGTGAATTCTGTGATTCATCCCATTCATGACCAGATCCTTTATTTAAATGAGAAGCATAAAAAGCAACTAAAACTAGAATATGGTGTTGAACCGTGGACGTTTGAACAACATCTTGGAGAGGCTGTTTTCATACCTGCTGGATGCCCACATCAAGTGAGAAATAGAAAGTCTTGCATAAAAGTGGCTATGGACTTCGTTTCGCCCGAGAATGTTCGAGAATGTGTTCAATTAACAGAGGAATTTCGTTTACTTCCGAAAAACCATAGATCTAAGGAAGATAAATTGGAGATAAAGAAGATGGCACTTTATGCTGCTCATGTTGCTGTTGCTGAAGCCAATAAACTCATGGGAGCTAAATGA 4956 0.4096 MDVGGDEEEFRRCSIQGGSGWRCKERALPGNPQCEKHHLYALNRKKNSKKSSSGRKRKAEESSENGVVEDDGGGKGLFDGGDDGGGGVFVEGEVNGGVNLGVDSGSFNLWQQGEGQQLEVFGEGNGNLGKFLGDGVEFLGGFVEDRNGVGLGQPWSSVGVFGNAGGVSGVVKEDHGNRVDGVCQNDSLGFHSQGIDGLIGEEDGAGFGNLYDRSFQALLSQGKVCEEDVNLIDGATGFQGLDGESAYDFRGEVGEGVGNLSQQDGKFGGEKNVDNVLEAPNSNSSDKMKAIGVEEGMELLPSGGVSTNEEAKGEVLKPLTRRGGRPKGSKNKKKKRVSLAVDGEAACGSDNAGTIGMDTVEVLENEKSVFCGKSDGEGVEMGEIARTRECSQPEDQKCTGEIDLAAGYEVAGVGEISRPLNKEKNVEEVSSEVAVEIARPKKRGRPKSSANKKVTCSASSKEGAGDITTQGSEEKMLIVPYQEDADEFASLTKKLGPALSTRNKLKGIEFEGYKNPEMSSNVRLEGNDGTASGLEITTPAPLSETEKEMPFESAKHIENLTTPPIVKRGRPKGSKNKKKRLADQEHIGHGGDIIKLIGMENDEATAVSVGGQELVVQTLGQDEVQSVKPKIGRPKGAKNKKKNIDGEAENELHKEKKKRGRPKGSGKKQKETGNEKIAKGLVSESGDVHKIERRGRPKGSGKKKMDNSSRLDAEIECEKNTCVNGILSTTMPHKHIHEESILLLEDQVNKKDETDFVLECSKESGIEKVAKGLVSESDNVHKTQDVEVGDIFYEKEVKETIDHGLEPSDMMSDCETKKEPRNSRCHQCWKKSRTGLVVCSKCKRKKYCYECIAKWYQDKTREEIETACPFCLDYCNCRMCLKKAISTMNGNDEADRDVKLRKLFYLLKKTLPLLQDIQQEQRYELEVEASIHGSQLVEEENIQKAEVDEDDRVYCDNCNTSIVNFHRSCSNPDCQYDLCLTCCTELRLGVHCKDIPANGNDEMVDAPPESIAWRAETNGSITCPPKARGGCGIAILSLRRLFEANWINKLTRGVEELTVKYQPPIVDLSLGCSECRSFVEDVAQNSARKAASRETGYDNFLYCPDAVETGETTFEHFQRHWIRGEPVIVRNAYKKASGLSWDPMVMWRAFMGARKVLKEDAINFKAIDCLDWCEVEINAFQFFKGYLEGRRYRNGWPAMLKLKDWPPSNFFEECLPRHGAEFIAMLPFSDYTHPKSGILNLATKLPAVLKPDLGPKTYIAYGTSEELCRGDSVTKLHCDISDAVNILTHSAEVKPPPWQSRIIKKLRKKYEDEDMRELYSQDKKEVSLPRKRGRKRRVGFNVDPKTSEKEDPSGRDSPLQGSQGKEEKLDEQESSEPTKIKFDLNASEQEISDSPNFQQFDLNSHDSSFLVPGNNCESMHYDNVQQRCSSLGDGSYKGISSVIDDQPCSGTQETKIVNKLDSSEDFCSDIETNNVDSVEKDILSNNLCQNDFHLGTQNGSAVWDIFRRHDVPKLTEYLKKHHREFRHMVNLPVNSVIHPIHDQILYLNEKHKKQLKLEYGVEPWTFEQHLGEAVFIPAGCPHQVRNRKSCIKVAMDFVSPENVRECVQLTEEFRLLPKNHRSKEDKLEIKKMALYAAHVAVAEANKLMGAK 1651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04852 1651 MobiDBLite consensus disorder prediction 301 336 - -
Vivi4g04852 1651 MobiDBLite consensus disorder prediction 1314 1378 - -
Vivi4g04852 1651 ProSiteProfiles WRC domain profile. 7 51 IPR014977 -
Vivi4g04852 1651 Gene3D Cupin 1445 1623 - -
Vivi4g04852 1651 Gene3D Cupin 1102 1351 - -
Vivi4g04852 1651 MobiDBLite consensus disorder prediction 563 586 - -
Vivi4g04852 1651 MobiDBLite consensus disorder prediction 440 471 - -
Vivi4g04852 1651 MobiDBLite consensus disorder prediction 20 82 - -
Vivi4g04852 1651 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 823 885 IPR018866 -
Vivi4g04852 1651 MobiDBLite consensus disorder prediction 638 656 - -
Vivi4g04852 1651 Pfam JmjC domain, hydroxylase 1482 1597 IPR003347 -
Vivi4g04852 1651 CDD cupin_RmlC-like 1538 1586 - -
Vivi4g04852 1651 SMART cupin_9 1215 1614 IPR003347 -
Vivi4g04852 1651 MobiDBLite consensus disorder prediction 1339 1378 - -
Vivi4g04852 1651 ProSiteProfiles JmjC domain profile. 1234 1614 IPR003347 -
Vivi4g04852 1651 MobiDBLite consensus disorder prediction 450 467 - -
Vivi4g04852 1651 MobiDBLite consensus disorder prediction 1314 1328 - -
Vivi4g04852 1651 MobiDBLite consensus disorder prediction 666 711 - -
Vivi4g04852 1651 SUPERFAMILY Clavaminate synthase-like 1112 1644 - -
Vivi4g04852 1651 MobiDBLite consensus disorder prediction 624 711 - -
Vivi4g04852 1651 ProSiteProfiles Zinc finger RING-type profile. 825 871 IPR001841 -
Vivi4g04852 1651 SMART AT_hook_2 656 668 IPR017956 GO:0003677
Vivi4g04852 1651 SMART AT_hook_2 440 452 IPR017956 GO:0003677
Vivi4g04852 1651 SMART AT_hook_2 320 332 IPR017956 GO:0003677
Vivi4g04852 1651 SMART AT_hook_2 691 703 IPR017956 GO:0003677
Vivi4g04852 1651 SMART AT_hook_2 567 577 IPR017956 GO:0003677
Vivi4g04852 1651 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 440 1648 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04852 Vivi-Chr4 177927733 177937453 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Vivi4g04852 JmjC 1.3e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04852 K15601 - lang:109335468 1200.27