Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04845 ATGGGAAGAAAAGGAGGAAGCTGGTTTTCCTCTGTCAAGAAAGTTTTCAAGTCTTCTTCATCTTCTAAAGACACGACAGCGCCCGTCTCCACGCCGGTGCAGCCAGACAAAAAGAAGGAAAACCGAGAGAAATTGGGGAATGAAGTGGCAGAGGAGGTGTCATTCGAGCATTTTCCAGCAGAGAGTTCACCTGATGATGTAACCAATGAGGGGAGTACAACATCAACTCCTGCGAGAGATGATAGAACTCACGCGATTGCTGTTGCAGAAGCCACCGCAGCAGCTTCAGCAGCTGCAACAGCAGCTGCTCAAGCTGCTGCTAGAGTCGTAAGATTGGCCGGGTATGGACGCTATAACAAGGAGGAAAGAGCAGCAACATTCATTCAATCATACTACAGAGGATACCTAGCTCGACGTGCTTTGCGCGCATTGAAGGGGTTAGTGAGGCTGCAGGCGTTGGTGAGGGGACACAACGTGCGGAAGCAAGCTCAAATGACAATGCGGTGTATGCAAGCGTTGGTACGGGTGCAGGCGCGAGTGAGAGCGCGACGACTTCAATTGAGCCACGAGAATGTTGAGAAGGAAATGGATGACTGTGAAGAAGAAGAATTTGTGAGACAGCAGGAGAGTTTTACTAAGCCTATGAGTCCTATGAGAAGGTCTTCAGGGATTAGTAATAATAATGGCTTGGATCATAACAAACGTCAAAGTAGCAAAAAAGCTAAAGAAGGTGATTTGAAAAAACATGAAGCTGCAATGAAGAGGGAAAGAGCTCTTGCCTATGCTTTCAATTATCAACAGCAACAGCAAAAGCAACATCTACTACATAGAGATAAAAATGGTGAAGATGTTGATATGAGAAGCTATGATCCTAATGATAATGAAAAAGGCCAATGGGGTTGGAATTGGTTGGAGCGTTGGATGTCATCACAACCCTACAATGCAAGAAACTTAGGACAACGTGAAACCTCTTACATGACACTACCTTCCACAACATCAACAACAACAGATAACATGTCTGAAAAAACGGTTGAAATGGACATGGTTGCAACACCAAGTAGAAACAACTTCAATATGGGCTTAATGGGCCAAGATTTTCATGATGCAAGTCCAGCTTTCAATAGGGTCCATCAGAGACCGCCAAGCCCGGGTCGACCTAGTTACATGGCCCCAACTCAATCTGCTAAGGCTAAGGTTAGAGTTGAAGGCCCATTTAAGCAGAGGGTTTCATCTGGGCCTTACTGGAACACGTCTACGAAGGGAGGATCTGTTATTGGATCGGGCTGTGACTCGTCTAGCTCGGGTGGTGGAACAGCTACTTATCAGATTCCGAGAAGCCCAGGCCCGAGAGTTAACGGTGTTCGTTCGCAGTCTAATCGGATTGTGGGTAGTAGTCAAGAGTTTGTTGAGGATTGGGCCCTTCCACTTGGAGCCCATGGTTGGGCTTAA 1449 0.4665 MGRKGGSWFSSVKKVFKSSSSSKDTTAPVSTPVQPDKKKENREKLGNEVAEEVSFEHFPAESSPDDVTNEGSTTSTPARDDRTHAIAVAEATAAASAAATAAAQAAARVVRLAGYGRYNKEERAATFIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLSHENVEKEMDDCEEEEFVRQQESFTKPMSPMRRSSGISNNNGLDHNKRQSSKKAKEGDLKKHEAAMKRERALAYAFNYQQQQQKQHLLHRDKNGEDVDMRSYDPNDNEKGQWGWNWLERWMSSQPYNARNLGQRETSYMTLPSTTSTTTDNMSEKTVEMDMVATPSRNNFNMGLMGQDFHDASPAFNRVHQRPPSPGRPSYMAPTQSAKAKVRVEGPFKQRVSSGPYWNTSTKGGSVIGSGCDSSSSGGGTATYQIPRSPGPRVNGVRSQSNRIVGSSQEFVEDWALPLGAHGWA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04845 482 MobiDBLite consensus disorder prediction 209 232 - -
Vivi4g04845 482 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Vivi4g04845 482 MobiDBLite consensus disorder prediction 427 441 - -
Vivi4g04845 482 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Vivi4g04845 482 SMART iq_5 120 142 IPR000048 GO:0005515
Vivi4g04845 482 SMART iq_5 143 164 IPR000048 GO:0005515
Vivi4g04845 482 MobiDBLite consensus disorder prediction 17 82 - -
Vivi4g04845 482 MobiDBLite consensus disorder prediction 35 59 - -
Vivi4g04845 482 Pfam Protein of unknown function (DUF4005) 377 424 IPR025064 -
Vivi4g04845 482 Coils Coil 175 202 - -
Vivi4g04845 482 MobiDBLite consensus disorder prediction 65 80 - -
Vivi4g04845 482 PANTHER IQ-DOMAIN 5-RELATED 1 414 - -
Vivi4g04845 482 Pfam IQ calmodulin-binding motif 122 142 IPR000048 GO:0005515
Vivi4g04845 482 Pfam IQ calmodulin-binding motif 148 163 IPR000048 GO:0005515
Vivi4g04845 482 MobiDBLite consensus disorder prediction 17 32 - -
Vivi4g04845 482 Gene3D - 122 163 - -
Vivi4g04845 482 MobiDBLite consensus disorder prediction 206 246 - -
Vivi4g04845 482 MobiDBLite consensus disorder prediction 427 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04845 Vivi-Chr4 177868687 177872381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04845 1 450 IQD Protein Family AT3G49260 49.578 3.80e-99 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04845 - - gmx:100798026 495.738