Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04844 ATGGGAAGAAAAGGAGGAAGCTGGTTTTCCTCTGTCAAGAAAGTTTTCAAGTCTTCTTCATCTTCTAAAGACACGACAGCGCCCGTCTCCACGCCGGTGCAGCCAGACAAAAAGAAGGAAAACCGAGAGAAATTGGGGAATGAAGTGGCAGAGGAGGTGTCATTCGAGCATTTTCCAGCAGAGAGTTCACCTGATGATGTAACCAATGAGGGGAGTACAACATCAACTCCTGCGAGAGATGATAGAACTCACGCGATTGCTGTTGCAGAAGCCACCGCAGCAGCTTCAGCAGCTGCAACAGCAGCTGCTCAAGCTGCTGCTAGAGTCGTAAGATTGGCCGGGTATGGACGCTATAACAAGGAGGAAAGAGCAGCAACATTCATTCAATCATACTACAGAGGATACCTAGCTCGACGTGCTTTGCGCGCATTGAAGGGGTTAGTGAGGCTGCAGGCGTTGGTGAGGGGACACAACGTGCGGAAGCAAGCTCAAATGACAATGCGGTGTATGCAAGCGTTGGTACGGGTGCAGGCGCGAGTGAGAGCGCGACGACTTCAATTGAGCCACGAGAATGTTGAGAAGGAAATGGATGACTGTGAAGAAGAAGAATTTGTGAGACAGCAGGAGAGTTTTACTAAGCCTATGAGTCCTATGAGAAGGTCTTCAGGGATTAGTAATAATAATGGCTTGGATCATAACAAACGTCAAAGTAGCAAAAAAGCTAAAGAAGGTGATTTGAAAAAACATGAAGCTGCAATGAAGAGGGAAAGAGCTCTTGCCTATGCTTTCAATTATCAACAGCAAAAGCAACATCTACTACATAGAGATAAAAATGGTGAAGATGTTGATATGAGAAGCTATGATCCTAATGATAATGAAAAAGGCCAATGGGGTTGGAATTGGTTGGAGCGTTGGATGTCATCACAACCCTACAATGCAAGAAACTTAGGACAACGTGAAACCTCTTACATGACACTACCTTCCACAACATCAACAACAACAGATAACATGTCTGAAAAAACGGTTGAAATGGACATGGTTGCAACACCAAGTAGAAACAACTTCAATATGGGCTTAATGGGCCAAGATTTTCATGATGCAAGTCCAGCTTTCAATAGGGTCCATCAGAGACCGCCAAGCCCGGGTCGACCTAGTTACATGGCCCCAACTCAATCTGCTAAGGCTAAGGTTAGAGTTGAAGGCCCATTTAAGCAGAGGGTTTCATCTGGGCCTTACTGGAACACGTCTACGAAGGGAGGATCTGTTATTGGATCGGGCTGTGACTCGTCTAGCTCGGGTGGTGGAACAGCTACTTATCAGATTCCGAGAAGCCCAGGCCCGAGAGTTAACGGTGTTCGTTCGCAGTCTAATCGGATTGTGGGTAGTAGTCAAGAGTTTGTTGAGGATTGGGCCCTTCCACTTGGAGCCCATGGTTGGGCTTAA 1443 0.4664 MGRKGGSWFSSVKKVFKSSSSSKDTTAPVSTPVQPDKKKENREKLGNEVAEEVSFEHFPAESSPDDVTNEGSTTSTPARDDRTHAIAVAEATAAASAAATAAAQAAARVVRLAGYGRYNKEERAATFIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLSHENVEKEMDDCEEEEFVRQQESFTKPMSPMRRSSGISNNNGLDHNKRQSSKKAKEGDLKKHEAAMKRERALAYAFNYQQQKQHLLHRDKNGEDVDMRSYDPNDNEKGQWGWNWLERWMSSQPYNARNLGQRETSYMTLPSTTSTTTDNMSEKTVEMDMVATPSRNNFNMGLMGQDFHDASPAFNRVHQRPPSPGRPSYMAPTQSAKAKVRVEGPFKQRVSSGPYWNTSTKGGSVIGSGCDSSSSGGGTATYQIPRSPGPRVNGVRSQSNRIVGSSQEFVEDWALPLGAHGWA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04844 480 MobiDBLite consensus disorder prediction 209 232 - -
Vivi4g04844 480 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Vivi4g04844 480 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Vivi4g04844 480 SMART iq_5 120 142 IPR000048 GO:0005515
Vivi4g04844 480 SMART iq_5 143 164 IPR000048 GO:0005515
Vivi4g04844 480 MobiDBLite consensus disorder prediction 17 82 - -
Vivi4g04844 480 MobiDBLite consensus disorder prediction 35 59 - -
Vivi4g04844 480 Pfam Protein of unknown function (DUF4005) 375 422 IPR025064 -
Vivi4g04844 480 Coils Coil 175 202 - -
Vivi4g04844 480 MobiDBLite consensus disorder prediction 65 80 - -
Vivi4g04844 480 MobiDBLite consensus disorder prediction 425 439 - -
Vivi4g04844 480 MobiDBLite consensus disorder prediction 17 32 - -
Vivi4g04844 480 Pfam IQ calmodulin-binding motif 122 142 IPR000048 GO:0005515
Vivi4g04844 480 Pfam IQ calmodulin-binding motif 148 163 IPR000048 GO:0005515
Vivi4g04844 480 PANTHER IQ-DOMAIN 5-RELATED 1 412 - -
Vivi4g04844 480 MobiDBLite consensus disorder prediction 206 246 - -
Vivi4g04844 480 Gene3D - 122 163 - -
Vivi4g04844 480 MobiDBLite consensus disorder prediction 425 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04844 Vivi-Chr4 177868687 177872383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04844 1 448 IQD Protein Family AT3G49260 50.000 1.96e-100 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04844 - - gmx:100798026 497.278