Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04829 ATGACTTCCCGTTTTCTGCTAAAACCCCTGAAATTTTGCTCGCGCTTAAACGCCGTTAACCTGAGAAACTGTCGTGTATCAGAGATGAGCTCTTCAGCTAGGGTTTCAAGTAACGGTGACGGCGGGGTAGTTCGTTTCCCGTTATCTGCGTCGAACGCTTTGATCATTCAGAAAGGTGATATCACGAAATGGTTCATCGATGGTTCCACTGACGCAATCGTGAATCCTGCAAATGAGAGAATGCTTGGAGGTGGTGGCGCTGATGGAGCTATACACAGGGCTGCAGGTCCGGATCTTCTTAGAGCATGTCGGAATGTTCCAGAAGTCAGGCCCGGAGTTCGCTGTCCCACGGGGGAAGCAAGGATCACACCGGGTTTCTTGCTACCTGCTTCTCATGTTATTCATACTGTTGGCCCAATCTACAATGTTGGTAGTAATCCTGCTGCCTCTCTGGCAAGTGCTTACAGGAATAGTTTGAGGGTTGCAAAAGAGAACAACATTCAGTATGTAGCATTCCCAGCCATATCATGTGGTATCTATGGATATCCTTATGAAGAAGCTGCTACTGTGGCAATTTCTACAATCAAAGAATTCCAAAATGACTTTAAGGAGGTCCACTTTGTTCTATTCGAGTCTGACATCTATGGCATTTGGTTAAATAAGTCAGATGAATTGCTGAAAGATTAG 687 0.4556 MTSRFLLKPLKFCSRLNAVNLRNCRVSEMSSSARVSSNGDGGVVRFPLSASNALIIQKGDITKWFIDGSTDAIVNPANERMLGGGGADGAIHRAAGPDLLRACRNVPEVRPGVRCPTGEARITPGFLLPASHVIHTVGPIYNVGSNPAASLASAYRNSLRVAKENNIQYVAFPAISCGIYGYPYEEAATVAISTIKEFQNDFKEVHFVLFESDIYGIWLNKSDELLKD 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04829 228 SMART YBR022w_8 53 191 IPR002589 -
Vivi4g04829 228 Pfam Macro domain 74 191 IPR002589 -
Vivi4g04829 228 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 45 225 - -
Vivi4g04829 228 SUPERFAMILY Macro domain-like 53 223 IPR043472 -
Vivi4g04829 228 ProSiteProfiles Macro domain profile. 41 226 IPR002589 -
Vivi4g04829 228 Gene3D Leucine Aminopeptidase, subunit E, domain 1 17 228 IPR043472 -
Vivi4g04829 228 CDD Macro_OAADPr_deacetylase 54 221 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04829 59 164 C2H2 Transcription Factor Family AT5G01310 36.134 1.15e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04829 K23518 - qsa:O6P43_020114 343.969