Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04795 ATGAAACCAAACACAAATCTCACACTATTATACACAACTTTCTTGGTTACAATATCCATAATAACAATATTTGCATCTGACGAATCCTTTTCTTCATCCTTACCCGGTTGCAAAAACACATGTGGAGACATAACAATTCCATATCCATTTGGTATATCAGAATCATCATCACCAAATCAAGGATCATGTTTTCTAGAGCCCAAATTCAACCTCACATGTGAAAACAACACAAAGTTAATATGGGGTGATGTTCCTGTTTTAGACATAAACATCCTCCAAGGTCAACTTGAACTCTTGTGTTTTGTCTCAAGTTACTGTGACAGCAAAAACTACAGCCAACCAACTTTAGACACTGCCAGTTTCAGCATATCAAGAAAGGAAAACAAGTTCATAACTATTGGTTGTGACCATTACGGTTTCATCGATAGCAATTACGACCAAGAGACATACACAACGGGGTGTTTAACAAGATGTAACGGTAATCGGAGGAGAATCGAGAACGGGACGTGTTCGGGGATCGGTTGTTGTCAAGTTGATATTCCACCTATGATGAGGAATATAAGTGTTAATGTTTTTGAGTTTACTAATTCGACGGAGTCGTTTGGATGTGCACATTCGTTTGTTGTTAAGAATGGATTTTATAATTTTTCTGTTACTGATTTGGATGATTTTCCTGATGAGAAGCTTCCTTTGATTCTTGATTGGAGTGTGGGGAGTAAAAATTGTGAGGCTTCCAAGGGTGAAGATGGTTATGCTTGCAAGAAGAATAGTGATTGTGATGATAAGGATATTGAGTTTGGTTATCAATGTAAATGTAAGAAGGGTTATGAAGGAAATCCTTATCATCCAGATGGCTGCCAAGACATCGACGAATGCAAGACTTCGAATAACACATGCCTAAGTGATGAACATTGTCGCAACAAAGATGGATTTTACGAATGTTTTTGCCCTAATGGACAATCGGGAAATGGAACATTGGAAGGAGGGTGTGGTAGACGAGACGTAATTACTAAGGTTGCCATTGGAGCAAGTGCTGGGCTAACTGTCCTATTTGTGGCGATTTCTTCTCTATACTTGACTTGTCAAAAAAGGAAACTCATCAAACTAAAACAAAAGTTCTTTCAACAAAATGGTGGTTTCATTTTGCAACAACAACTCTCCACAAGAGAAGATACATCTCAATCAGCTCAAATATTCACAGAACAGGAACTAAAAAAAGCCACCAACAATTACGATGAAAGCTTAATCATCGGTAGAGGAGGTTACGGTACAGTCTTCAAAGGAATTTTATCCGACAACAAAGTGGTTGCAGTCAAAAAATCCAAAATAATAGACGAAAATCAAATCGAGCAATTCATTAACGAGGTAGTTGTTCTGTCTCAAATAAATCATAGGAATGTCGTCAAACTCTTAGGATGTTGTTTGGAAACAGAAGTTCCTTCTCTAGTTTATGAATTCGTTAGCAACGGTACACTTTTCGATTTCATGCATAGTACTAAAGATAAAGAAAATAATCCAACATGGCAAACGCGTTTAAGAATCGCAGCAGAAACAGCCGGAGCTTTATCGTATCTACATTCATCTGCATCAATACCAATTATTCATAGAGATGTTAAGAGTACCAACATTCTCTTGGATGATAATTACACTGCAAAAGTTTCCGATTTCGGGGCATCAAGATTGGTTCCGCTCGATCAAACTGAGATAGCAACAATGGTGCAAGGAACACTCGGATACTTAGATCCAGAGTATATGCAAACACATCAATTAACCGAGAAAAGTGATGTGTACAGCTTCGGAGTAGTTCTTGCGGAACTACTAACCGGGGATAAACCTATTTCGTTTAATAGGCCCGAAGAGAATATTAGTCTTGCTATGCATTTTTTGTCTTGTTTGAAACAAGATAGAATTTTCGAAGCTATTGAAGTTGGAGTTATGAATGATGATAACAAGAATGAGATTATGGAGGTTGCTATTCTTGCAGCAAGGTGTTTGAGACTTAGAGGAGATGAAAGACCTAGCATGAAGGAAGTGGCTATGGAGTTGGAAGGTATAAGGTTGATGGAGAAGCATCCTTGGAATGAAACAGACCAAGATTTTGAGGAGAATCAACGGTTACTTCAGCAAGCAACTAGTAGCATTTATAATGAAAGCGGCGATAGCTATAATCTTGGTTTTACTGTTGGGTATGATAGCTTGAAAGATCAACCATTGATTGCATTGGATGATGGAAGATGA 2238 0.3794 MKPNTNLTLLYTTFLVTISIITIFASDESFSSSLPGCKNTCGDITIPYPFGISESSSPNQGSCFLEPKFNLTCENNTKLIWGDVPVLDINILQGQLELLCFVSSYCDSKNYSQPTLDTASFSISRKENKFITIGCDHYGFIDSNYDQETYTTGCLTRCNGNRRRIENGTCSGIGCCQVDIPPMMRNISVNVFEFTNSTESFGCAHSFVVKNGFYNFSVTDLDDFPDEKLPLILDWSVGSKNCEASKGEDGYACKKNSDCDDKDIEFGYQCKCKKGYEGNPYHPDGCQDIDECKTSNNTCLSDEHCRNKDGFYECFCPNGQSGNGTLEGGCGRRDVITKVAIGASAGLTVLFVAISSLYLTCQKRKLIKLKQKFFQQNGGFILQQQLSTREDTSQSAQIFTEQELKKATNNYDESLIIGRGGYGTVFKGILSDNKVVAVKKSKIIDENQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPSLVYEFVSNGTLFDFMHSTKDKENNPTWQTRLRIAAETAGALSYLHSSASIPIIHRDVKSTNILLDDNYTAKVSDFGASRLVPLDQTEIATMVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGDKPISFNRPEENISLAMHFLSCLKQDRIFEAIEVGVMNDDNKNEIMEVAILAARCLRLRGDERPSMKEVAMELEGIRLMEKHPWNETDQDFEENQRLLQQATSSIYNESGDSYNLGFTVGYDSLKDQPLIALDDGR 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04795 745 SMART egf_5 241 287 IPR000742 -
Vivi4g04795 745 SMART egf_5 291 331 IPR000742 -
Vivi4g04795 745 SUPERFAMILY EGF/Laminin 287 323 - -
Vivi4g04795 745 Pfam Protein tyrosine and serine/threonine kinase 417 682 IPR001245 GO:0004672|GO:0006468
Vivi4g04795 745 Pfam Calcium-binding EGF domain 288 330 IPR001881 GO:0005509
Vivi4g04795 745 Pfam Wall-associated receptor kinase galacturonan-binding 37 94 IPR025287 GO:0030247
Vivi4g04795 745 ProSiteProfiles Protein kinase domain profile. 411 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04795 745 SUPERFAMILY Protein kinase-like (PK-like) 392 683 IPR011009 -
Vivi4g04795 745 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Vivi4g04795 745 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 305 316 IPR000152 -
Vivi4g04795 745 Gene3D Phosphorylase Kinase; domain 1 377 486 - -
Vivi4g04795 745 Pfam Wall-associated kinase 168 273 IPR013695 GO:0004674|GO:0016020
Vivi4g04795 745 FunFam Wall-associated receptor kinase 2 487 705 - -
Vivi4g04795 745 SMART egfca_6 288 331 IPR001881 GO:0005509
Vivi4g04795 745 FunFam Wall-associated receptor kinase 2 381 486 - -
Vivi4g04795 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 32 694 IPR045274 GO:0007166
Vivi4g04795 745 Gene3D Transferase(Phosphotransferase) domain 1 487 725 - -
Vivi4g04795 745 Gene3D Laminin 239 328 - -
Vivi4g04795 745 ProSitePatterns Calcium-binding EGF-like domain signature. 288 314 IPR018097 GO:0005509
Vivi4g04795 745 ProSiteProfiles EGF-like domain profile. 288 326 IPR000742 -
Vivi4g04795 745 CDD EGF_CA 288 322 - -
Vivi4g04795 745 CDD STKc_IRAK 417 685 - -
Vivi4g04795 745 SMART serkin_6 411 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04795 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04795 Vivi-Chr4 177280362 177283470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04795 37 745 Receptor kinase-like Gene Family AT1G21230 45.578 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Vivi4g04795 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04795 - - gsj:114381577 969.533