Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04791 ATGGCCGGTGATTTAATCGCTCAAGATTTTCAAGTTGGTTGTCATGTAATATTGGTTACTCCCACTTCTTGGCTGAGTTTGCAAAGAAATCATCAACTACTTTCCTATGTTGATATGCACAAGGCCTTAGTCTATGGATTTGAGATTTCTTGGTTGGATCTTGCCTGTAATAATAGCTGCGGAGAATCAAATTATTGTTCCTTCAACGCTACCTCCGACAAACTTCAATGCTATGCCGATGTCGACTGCAGTAATATCCGATGGGAATGGATGAATAATTGTGGAATATGGCCCCAGCTGCGTTTATTCGTTAAAGATTCTATCGTATATATCTGGAAAGTATTGCTTGAAACTATAAAAGCACCCTTCAACCGACATCCTTTTATTTCCAACATGTTAAGTGGCGAGTATCCCTTAAGAGTTTTGATAGGACAATATGCTCTAACGTCGTTTTTAGTGGCTAGATTTCTCTTTGGGATGACATTATTTATTGCTTTGTTGATATACAAACGGAGGAAAAGACATTTGTCAATGTTTGAATATATCGAAGTATATCTACAGCAACAAAACAACCTCAATCCCATCGGATATTCATACAAAGAAATTAAGAAAATGGTTAGAGGTTTCAAAGACAAGTTAGGTGAAGGAGGCTTTGGCACTGTGTTTAAAGGAAATCTTCGTAGTGGACCTTGTGTGGCAATCAAGATGTTGCGTGAGTCTAAAGGTAATGGACAAGACTTTATTAGTGAAGTAGCAACCATCGGAAGGATACATCATTTGAATGTGGTGCAATTAATTGGATTTTGTGCGGAGGGATCAAAACGTGCTCTTGTTTACGATTTCATGCCTAATGGATCTCTTGATAAATTTATTTTCTCTAAAGAAGGGAGTAAAAATATAAGCTATAGCCAAATTTTTGACATAGCAGTTGGAGTAGCTCGTGGAATTGCTTATCTCCATCATGGATGTGAAATGAAGATTTTGCATTTTGATATTAAGCCTCACAACATTCTTCTTGATGAGAACTTCATCCCAAAAGTCTCTGACTTTGGATTGGCTAAGTTATATCCGGCAGAGAATAGCATCATCACAATGACTGCAGCGAGAGGAACAATTGGATATATGGCTCCAGAATTGTTCTACAAAAATATTGGAGGAGTGTCTTATAAGGCCGATGTTTATAGCTTTGGGATGCTTTTGATGGAAATGGCAAGTAAAAGAAAAAACCTAAATGTCCATGCAGAACATTCCAGCCAACTTTACTTTCCTTTATGGATTTATGATCAAGTTGAAAAAGAGCAAGACATAGAAATGGAAGATACCACTGAAGAGGAAAAGAAAATGATAAAGAAGATGGTCATAGTCGCACTCTGGTGCATACAATTGAAACCTGATGATCTTCCTTCAATGAACAAAGTCGTGGAAATGCTCGAAGGAGATGTTGAAAGTCTTAACATGCCTCCAAAGCCACTTCTTTATCCCAATGAAACCATTGAAAACAATCAAAGAAGCAGCTTGGACCAAACGATGTCAAGTGGTTACACTAGTGGTTCTTATGATTCTGTGGAAATAGAAGCTAATTCTCTAATAGAGAACATTTCATGA 1605 0.3745 MAGDLIAQDFQVGCHVILVTPTSWLSLQRNHQLLSYVDMHKALVYGFEISWLDLACNNSCGESNYCSFNATSDKLQCYADVDCSNIRWEWMNNCGIWPQLRLFVKDSIVYIWKVLLETIKAPFNRHPFISNMLSGEYPLRVLIGQYALTSFLVARFLFGMTLFIALLIYKRRKRHLSMFEYIEVYLQQQNNLNPIGYSYKEIKKMVRGFKDKLGEGGFGTVFKGNLRSGPCVAIKMLRESKGNGQDFISEVATIGRIHHLNVVQLIGFCAEGSKRALVYDFMPNGSLDKFIFSKEGSKNISYSQIFDIAVGVARGIAYLHHGCEMKILHFDIKPHNILLDENFIPKVSDFGLAKLYPAENSIITMTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKRKNLNVHAEHSSQLYFPLWIYDQVEKEQDIEMEDTTEEEKKMIKKMVIVALWCIQLKPDDLPSMNKVVEMLEGDVESLNMPPKPLLYPNETIENNQRSSLDQTMSSGYTSGSYDSVEIEANSLIENIS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04791 534 ProSiteProfiles Protein kinase domain profile. 207 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04791 534 FunFam PR5-like receptor kinase 282 489 - -
Vivi4g04791 534 PANTHER RUST RESISTANCE KINASE LR10-RELATED 181 500 IPR045874 GO:0004672
Vivi4g04791 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 327 339 IPR008271 GO:0004672|GO:0006468
Vivi4g04791 534 FunFam serine/threonine-protein kinase PBS1-like 179 281 - -
Vivi4g04791 534 SUPERFAMILY Protein kinase-like (PK-like) 188 478 IPR011009 -
Vivi4g04791 534 SMART serkin_6 207 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04791 534 Gene3D Phosphorylase Kinase; domain 1 183 281 - -
Vivi4g04791 534 Gene3D Transferase(Phosphotransferase) domain 1 282 486 - -
Vivi4g04791 534 ProSitePatterns Protein kinases ATP-binding region signature. 213 235 IPR017441 GO:0005524
Vivi4g04791 534 Pfam Protein tyrosine and serine/threonine kinase 209 477 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04791 Vivi-Chr4 177253318 177271093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04791 162 511 Receptor kinase-like Gene Family AT4G18250 49.727 1.30e-112 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi4g04791 PK_Tyr_Ser-Thr 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04791 - - tpra:123893257 706.057