Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04788 ATGAAAAAGGTCCTCATTCAGAACAATGAGCAGTTGGAGTTGGTTAGGGAGGAGATACGTGTCTCGTCACTGTTTAGTCATCCGAATCTCCTGCCGCTTCTTGATCATGCTATCATTTCTGTTAAGCCTACTGCAGAGACATCTTGGAGCCATGAAGTATACTTGTTATTTCCGGTTCATTTGGATGGAACATTGCTAGATAATGCCAAAACAAAGAAAGCCAAGAAAGAGCACTATTCTACCTCAGATGTTCTTCAAATATTTCAGCAGATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGAGATATCAAACCTCAAAATCTATTGGTTATGAAATGTCAGTATGTTGTTCGAGGAGAGATTGTTACACTTGCTCAGAATTTGCAAAAAGATTTGCTGGCCAATCCAAGTGCTCATTCTTTTGATGAGTTGAATGCACATAAAGCACACAATGATGGAGAATTCAAACTGCATGCAGAAACCGTCATAGCAATCATACCTCTCCTTCCAATTATAGAAACAATATTAAGAACATTTCATTGA 561 0.3832 MKKVLIQNNEQLELVREEIRVSSLFSHPNLLPLLDHAIISVKPTAETSWSHEVYLLFPVHLDGTLLDNAKTKKAKKEHYSTSDVLQIFQQIFRALSYIHRCIGVCHRDIKPQNLLVMKCQYVVRGEIVTLAQNLQKDLLANPSAHSFDELNAHKAHNDGEFKLHAETVIAIIPLLPIIETILRTFH 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04788 186 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04788 186 Gene3D Transferase(Phosphotransferase) domain 1 1 153 - -
Vivi4g04788 186 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 118 - -
Vivi4g04788 186 SUPERFAMILY Protein kinase-like (PK-like) 3 117 IPR011009 -
Vivi4g04788 186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 104 116 IPR008271 GO:0004672|GO:0006468
Vivi4g04788 186 Pfam Protein kinase domain 6 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04788 Vivi-Chr4 177205267 177208344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04788 13 116 CBL-interacting serine-threonine protein kinases AT5G01810 32.381 1.28e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Vivi4g04788 Pkinase 3.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04788 K08856 - gmx:100810160 176.407