Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04786 ATGAAAAAGGTCCTCATTCAGAACAATGAGCAGTTGGAGTTGGTTAGGGAGGAGATACGTGTCTCGTCACTGTTTAGTCATCCGAATCTCCTGCCGCTTCTTGATCATGCTATCATTTCTGTTAAGCCTACTGCAGAGACATCTTGGAGCCATGAAGTATACTTGTTATTTCCGGTTCATTTGGATGGAACATTGCTAGATAATGCCAAAACAAAGAAAGCCAAGAAAGAGCACTATTCTACCTCAGATGTTCTTCAAATATTTCAGCAGATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGAGATATCAAACCTCAAAATCTATTGGTCAAGACCTATGGTTATGAAATGTCAGTATGTTGTTCGAGGAGAGATTGTTACACTTGCTCAGGTACTGTGATTCTCATTTATATTGTGTTGGTGAAATCAGGTTTCATTGAAAAGAATTTGCAAAAAGATTTGCTGGCCAATCCAAGTGCTCATTCTTTTGATGAGATATGA 519 0.3854 MKKVLIQNNEQLELVREEIRVSSLFSHPNLLPLLDHAIISVKPTAETSWSHEVYLLFPVHLDGTLLDNAKTKKAKKEHYSTSDVLQIFQQIFRALSYIHRCIGVCHRDIKPQNLLVKTYGYEMSVCCSRRDCYTCSGTVILIYIVLVKSGFIEKNLQKDLLANPSAHSFDEI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04786 172 Pfam Protein kinase domain 6 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04786 172 SMART serkin_6 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04786 172 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 118 - -
Vivi4g04786 172 SUPERFAMILY Protein kinase-like (PK-like) 3 119 IPR011009 -
Vivi4g04786 172 ProSitePatterns Serine/Threonine protein kinases active-site signature. 104 116 IPR008271 GO:0004672|GO:0006468
Vivi4g04786 172 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04786 172 Gene3D Transferase(Phosphotransferase) domain 1 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04786 Vivi-Chr4 177204951 177208344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04786 13 120 CBL-interacting serine-threonine protein kinases AT5G01810 32.110 1.53e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Vivi4g04786 Pkinase 2.3e-14 CL0016