Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04757 ATGGAAAAGGTTGTCGGAGGAAAGTATAAAATTGGTCGCAAAATTGGGAGTGGATCATTCGGTGAAATTTATATTGGGGCACATATTGTGACTTCTGAGCTTGTGGCCATTAAGAAGGAGAACAAGAAAACCAAACAACCACAGCTACTGTATGAGGCAAAGTTGTATAATATTCTTAAAGGAGGAAGTGGTATTCCAAGAATGAAATGGTTTGGTGCTGATGGAGACTATAATGTTCTTGTTCTTGAACTTATGGGACCGAGTCTCGAAGACCTTCTTTATTATTGTGAGGGGAAGTTTTCGCTGAAATCGGTTTTGATGTTGGCTGATCAGATGCTTACGAGGATAGAGTATTTACATTCCAAGGGACTTCTGCATAGAGATATCAAACCAGATAACTTCCTTATGGGTCTTGGGAAGAAAGCAAATCAGGTTTGTATGATTGATTTTGGACTTTCAAAAGGATATAGAGATCCTATCAGTTACAAGCACATTCCATACAGAGAGAACAAAAACTTAACAGGAACTGCACGTTACGCAAGTTGCAATACTCATAAAGGAATTGAACAAAGTCGCAGAGATGATTTGGAGTCTCTAGGCTATGTTCTTTTGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTACAAGCTGCCACGAGAACACAAAAATATGAAAAGATTTGTAAAACGAAGTTATCAATTCGCACCGAGGTACTTTGCAAGTCATATCCTGTGGAGTTCGCTTCTTACTTTCATTATTGCCGCTCCTTGACATTTGATCAACGACCAGATTATGGATATTTGAGACGCCTGTTTCGTGAATTGTTCACTTCTAAAGGATATGATGCTGACTATTTATTCGACTGGACGATTTTAAAATATCAGGAGATACAACAAATAAAGGAACGAAATGAATCCATTGCTCCAGTTGCTTTACCTACCACTCATGAACCGGTGGATACCGACGAGCAAATAGAAGTCAATGATTGTACACAAACTGCTGTCGCAAAACCAATAGTCTATTGCGATCGTCCACGTGTTTGTATGAACCTCAGGGTAGCTAATATTGAATGTCTTGATGATGAGATTGAAACGGAGAAACAGAATGTGAATACTGGTTTACCTATTTCAAATGTTCCAAAACCAGAAAGGACTGTAGAAGCCTCAAATCCAGACGGCGTGTTAGCGAGTAAATGTGGTGCTTCCGGTGATATTATTCCTTCACTACGACGAGTTTCATCCTTCAATTAG 1254 0.3939 MEKVVGGKYKIGRKIGSGSFGEIYIGAHIVTSELVAIKKENKKTKQPQLLYEAKLYNILKGGSGIPRMKWFGADGDYNVLVLELMGPSLEDLLYYCEGKFSLKSVLMLADQMLTRIEYLHSKGLLHRDIKPDNFLMGLGKKANQVCMIDFGLSKGYRDPISYKHIPYRENKNLTGTARYASCNTHKGIEQSRRDDLESLGYVLLYFLRGSLPWQGLQAATRTQKYEKICKTKLSIRTEVLCKSYPVEFASYFHYCRSLTFDQRPDYGYLRRLFRELFTSKGYDADYLFDWTILKYQEIQQIKERNESIAPVALPTTHEPVDTDEQIEVNDCTQTAVAKPIVYCDRPRVCMNLRVANIECLDDEIETEKQNVNTGLPISNVPKPERTVEASNPDGVLASKCGASGDIIPSLRRVSSFN 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04757 417 Gene3D Transferase(Phosphotransferase) domain 1 1 337 - -
Vivi4g04757 417 PANTHER CASEIN KINASE-RELATED 7 320 - -
Vivi4g04757 417 MobiDBLite consensus disorder prediction 373 394 - -
Vivi4g04757 417 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04757 417 Pfam Protein kinase domain 9 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04757 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Vivi4g04757 417 FunFam CK1 family protein kinase 1 326 - -
Vivi4g04757 417 ProSitePatterns Protein kinases ATP-binding region signature. 15 39 IPR017441 GO:0005524
Vivi4g04757 417 SMART serkin_6 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04757 417 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04757 Vivi-Chr4 176817118 176820720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04757 8 228 MAP Kinase Kinase Kinase AT1G54960 27.039 8.42e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Vivi4g04757 Pkinase 5.1e-30 CL0016