Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04743 ATGGGAAGCTGTTCAAATATGATGGTAGTCATGATGCTAACAGTGGTTTGCAGCAGAGTTAATGGTTGTAGCGGGAAGGATTCCAGATGCGGTCACCACGGCCCGCATATCCGATTTCCATTCTATTTTAAAAATAGTGAAACAGAACATGGATGTGGTTATAAAGGCTTTGGTCTTACTTGTTCAAACGAACACAAAACTCTGATTGAGCTTCCTTCACAATCTGGTCCAATTATACTCCAAGTCAAAAGTATAAATTATCAAGACCAATATCTAATCGCATGTGACCCTGAAAATTGCTTTGCTGGAAAGCTTCTTAAACTCTACCGATCACAAATGTCTACTTTTCAGTTCTATAAGGAACCTGAAGACACTTATAATAAATACCGTTTCCTCAATTGTACCTCATTACCCTGCCAGGTTTATGTTGTTCAGTCTAGCAGCAATTTCCTTCGTTCGGGTTTTGATCCAATACTCTGCACCACAACTCCAGATATTATTTCTTCACCGTACGTGCCGGTAGAGGAGGATCAGAATGATTGCTTGGGTTTGACATGGTCGAAACCCAATTGTAGCATGTGTGAAATACAAGGCAAGATTTGTAAACCCAAAAATAACGGAACTGGAGACGAGATAGAATGTCTTGACCGTCATCACAAACCAATTAAGAAGATACTTCTATATATCACAGTTGCGTTAGTTGGTGCAGTTATGACGATGTTGATTCTTAGGACATGTTTGCGTCTCTATAACTATTTCAAAACAAAGAGTGAAGACGAGACTAGAATTGAAAAGTTTTTAGAGGATTATCGGGCGCTCAATCCCACGAGATTCTCTTTTGCGGATATAAGGCGGATTACAAATAACTTTAGAGAAGAGTTAGGTGAAGGGGCTCATGGCGCTGTATTCAAAGGTAAATTATCGAATGAAATTCTGGTGGCTGTGAAGATGCTAAAAAACACAGTGGGGGATGGAAAAGAGTTTATCAATGAAGTGAAAGCTATGGGAAAAATTCATCACATTAATATAGTTCGTTTGGTTGGATTCTGCGCGGATGGATCTTATCGTGCTCTTGTTTATAATTTCTTTTCAAACGGCTCGTTACAAAACTTCATAACCCAACCTAAAAACATTGATAATTTTTTAGGTTGGAAAATGCTAGAACAAATAGCTCTTGGCATAGCTAAAGGTATTGAGTACCTTCACACGAGTTGTGATCAACGAATTCTTCACTTTGATATTAATCCCCACAACGTGTTATTAGACGACAAGTTTGTTCCAAAGATTACAGATTTTGGTTTGGCTAAATTGTGTTCTAAAACTGAAAGCATAGTTTCAGTAACTGCTGCGAGAGGGACTCTGGGTTACATTGCGCCTGAAGTATTTTCGAGGAACTTTGGAAATGTATCATATAAAGCTGACATATATAGTTATGGGATGTTACTGCTTGAAATGGTTGGAGAAAGAAAGAGTATAAGTCAGTTTTCAGAGGAAAATTTTAAAGTTTTGTATCTAGAATGGGTTCAGAATTTTCTTGAAGGGCGCGATATGCAATTGAAGATTGAGAAAGCAGGAGATGATGTAATTTTAAAGGTAGGATTGTGGTGTATTCAGTGGAATCCGATAAATCGTCCATCCATAAAAGGTGTGCTACAAATGTTAGAAGCTCAAGAAGATGGAAATTTGATTGTGCCTCCAAACCCTTTCAACTCTACAATTTTGAAAAATGGTGAAATCTCGAAAAAGTATTCAACTTTAGAGTTAGAGTCTATACATGAATGA 1782 0.3771 MGSCSNMMVVMMLTVVCSRVNGCSGKDSRCGHHGPHIRFPFYFKNSETEHGCGYKGFGLTCSNEHKTLIELPSQSGPIILQVKSINYQDQYLIACDPENCFAGKLLKLYRSQMSTFQFYKEPEDTYNKYRFLNCTSLPCQVYVVQSSSNFLRSGFDPILCTTTPDIISSPYVPVEEDQNDCLGLTWSKPNCSMCEIQGKICKPKNNGTGDEIECLDRHHKPIKKILLYITVALVGAVMTMLILRTCLRLYNYFKTKSEDETRIEKFLEDYRALNPTRFSFADIRRITNNFREELGEGAHGAVFKGKLSNEILVAVKMLKNTVGDGKEFINEVKAMGKIHHINIVRLVGFCADGSYRALVYNFFSNGSLQNFITQPKNIDNFLGWKMLEQIALGIAKGIEYLHTSCDQRILHFDINPHNVLLDDKFVPKITDFGLAKLCSKTESIVSVTAARGTLGYIAPEVFSRNFGNVSYKADIYSYGMLLLEMVGERKSISQFSEENFKVLYLEWVQNFLEGRDMQLKIEKAGDDVILKVGLWCIQWNPINRPSIKGVLQMLEAQEDGNLIVPPNPFNSTILKNGEISKKYSTLELESIHE 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04743 593 Gene3D Phosphorylase Kinase; domain 1 262 362 - -
Vivi4g04743 593 PANTHER RUST RESISTANCE KINASE LR10-RELATED 259 573 IPR045874 GO:0004672
Vivi4g04743 593 Pfam Wall-associated receptor kinase galacturonan-binding 25 92 IPR025287 GO:0030247
Vivi4g04743 593 Pfam Protein kinase domain 291 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04743 593 FunFam PR5-like receptor kinase 363 565 - -
Vivi4g04743 593 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Vivi4g04743 593 Gene3D Transferase(Phosphotransferase) domain 1 363 563 - -
Vivi4g04743 593 FunFam serine/threonine-protein kinase PBS1-like 255 362 - -
Vivi4g04743 593 ProSiteProfiles Protein kinase domain profile. 288 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04743 593 SUPERFAMILY Protein kinase-like (PK-like) 269 556 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04743 Vivi-Chr4 176563622 176565998 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04743 260 568 Receptor kinase-like Gene Family AT1G66980 48.750 6.45e-92 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi4g04743 Pkinase 4.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04743 - - aip:107619931 596.275