Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04724 ATGTCACTTATGACAATTCTCGCACTACTGTTGTTGTTGCTAATGCGACTTGGAATAAGCTTGGCTGATGCACCAAATCAATGTCCCTTCAAGCTCAACTGTACACATAACAGGAAGATTCTTGAATTTCCTACTCATCCAACCCCTTTGAAACTCATCATCACTGACATTAATTATAGATTCCGACAGGCATATCTATCTGATCCTGGAAACTGTCTATCACAACTCTTACTTGACCACAATTTTTCATCAGTTTTCCCTTTTAATATCTCTCATTTCCCCGAATTACCTGAACCTTACAACATTAGTTTCTTTAATTGTTCTTCAGTATTACAACTCAGACAAGACTATCTATATCTAATGAACCGTAGGCCACTAGATTTGAAATCTTGTCCAATTTATGTAGCTGATTCAAATTTCGATGGTATAGTTCAATCTGACTTAGTATACTGCACCAAAATGTTTGATCGTGTTTTTTTATATGATGCATATAGTATTGGATCCAACATGCTCTCATGGACATGGTCTGGAACAAATTTTGACATAGGATGCTTGAAATGTCAACATAAATCAAACAAGAAGTTAATATTCATTGTTTTAATCTCTATAGGTGTAATAATCGGCTCCACTTTGCTAGTCCTTGTACTCGCTGCTATTGTTCGAATTCATCGCCATTTCAAGATGAAAGGCGAAGATCATACAAGAATCGAAAAGTTTTTGAAGGATTACAAGGCATTAAATCCAACAAGATTCTCCTATGCTGACATAAAGAGAATCACGGATAAGTTTAAGGAGAAATTAGGCGAAGGAGCTCATGGGGCTGTTTACAAAGGTAAATTATCAAACCAAATTTTGGTTGCGGTTAAGATGCTCAATAACGCCGAGGGAGATGGAAGCGAGTTCATAAATGAAGTCGGAACCATGGGAAAAATCCACCATCTCAATGTCGTTCGTTTGCTTGGCTTTTGTGCAGATGGATTTCATCGCGCTCTAGTATATGACTTTTTTCCAAATGGATCATTGCAGAAATTCATTTCTCCCCCTAACAACAAAGACAGTTTCCTTGGATGGAATAAGTTACAACAAATTGCTTTAGGTATAGCGAACGGGATTGAATATCTTCATCAGGGTTGTGATCAAAGAATTCTTCACTTTGACATTAATCCACATAATGTACTAATTGATGACAATTTCAACCCAAAAATTACAGACTTTGGTTTGGCTAAGATGTACTCGAAAAATCAAAGTGTTGTATCTATGACGGCCGCTAGAGGAACATTAGGATACATGGCACCTGAAGTTTTTTCTAGAAATTTCGGAAATGTATCTTATAAGTCTGATATATATAGCTATGGTATGTTGTTGTTAGAGATAGTTGGAGGAAGAAAGAATATAAAAACAACTACAAATGAAGACGATTTTCAAGTTCTATATCCCGATTGGATCCACGGTTTGCTTGAAGGCGGAGATATACAAATCCCTATAGATGAAGAAGGAGATTTTGGAATTGCGAAAAAATTGGCAATTGTTGGACTTTGGTGCATTCAGTGGCAACCTATGCACCGTCCGAGTATGAAAACTGTGATGCAAATGCTGCAAGGAGATGGAGACAAGTTGAAAGTTCCATCCAACCCTTTTGGACCTACAAGTTCAGCAGATATAACTACAAATAATGTTGCAGCAGGATATAGGAATTTGGATCTTGAAGTGATTGAAGAAATGTTTTGA 1728 0.3686 MSLMTILALLLLLLMRLGISLADAPNQCPFKLNCTHNRKILEFPTHPTPLKLIITDINYRFRQAYLSDPGNCLSQLLLDHNFSSVFPFNISHFPELPEPYNISFFNCSSVLQLRQDYLYLMNRRPLDLKSCPIYVADSNFDGIVQSDLVYCTKMFDRVFLYDAYSIGSNMLSWTWSGTNFDIGCLKCQHKSNKKLIFIVLISIGVIIGSTLLVLVLAAIVRIHRHFKMKGEDHTRIEKFLKDYKALNPTRFSYADIKRITDKFKEKLGEGAHGAVYKGKLSNQILVAVKMLNNAEGDGSEFINEVGTMGKIHHLNVVRLLGFCADGFHRALVYDFFPNGSLQKFISPPNNKDSFLGWNKLQQIALGIANGIEYLHQGCDQRILHFDINPHNVLIDDNFNPKITDFGLAKMYSKNQSVVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEIVGGRKNIKTTTNEDDFQVLYPDWIHGLLEGGDIQIPIDEEGDFGIAKKLAIVGLWCIQWQPMHRPSMKTVMQMLQGDGDKLKVPSNPFGPTSSADITTNNVAAGYRNLDLEVIEEMF 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04724 575 Gene3D Phosphorylase Kinase; domain 1 235 335 - -
Vivi4g04724 575 PANTHER RUST RESISTANCE KINASE LR10-RELATED 232 550 IPR045874 GO:0004672
Vivi4g04724 575 FunFam S-receptor-like serine/threonine-protein kinase 231 335 - -
Vivi4g04724 575 ProSiteProfiles Protein kinase domain profile. 261 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04724 575 ProSitePatterns Protein kinases ATP-binding region signature. 267 289 IPR017441 GO:0005524
Vivi4g04724 575 Gene3D Transferase(Phosphotransferase) domain 1 336 541 - -
Vivi4g04724 575 Pfam Protein kinase domain 264 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04724 575 FunFam PR5-like receptor kinase 336 543 - -
Vivi4g04724 575 SUPERFAMILY Protein kinase-like (PK-like) 244 532 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04724 Vivi-Chr4 176162767 176164900 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04724 205 545 Receptor kinase-like Gene Family AT1G66910 46.439 7.21e-104 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi4g04724 Pkinase 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04724 - - tpra:123893290 741.11