Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04721 ATGATTTGCAATCACATTTCTTCTTTCATGTTGACAATATTAGCAATAACTTTGCTAATATCGCTGCTTGCAAATAGCGAGGATGTCCCATTCCCATCCATGGCATGTCCTTTCAATCTAACCTGCACACATGATAACAGCATGATTCTTGAACTACCAGCATACCCAGTACCTATAAGACTCCTCGTCAAAGAAATTAACTACACATCGCATACATTAGAAGCATGTGATGCTGAAAATTGTCTTCCACGCCTCTTTCTTCACCACAATTTCTCTTCATCAATTTTTCCTTTTCGGATTCATTCTTGGTTGGATTCGGGATACCAGGATCTTACCAATACTAGCTTATTCGATTGTTCTTCATTAGGACGGCGTTATCTGAGGAAAGACATCGCTTACCAGCAGGACATGGTTTCTTGTCCAATTTATATGGCAGGATTTAACGAGAATATGGTTGAATCATGCCTTGTTTTCTGCAACAAACTGTCTCGACCAGTTTCGCCCCTTATTCTTTCGGAAGATACCGTAAATGGGATACAACAAAACTCAATCTCACTGTCATGGTCGGAAACAATTTTTCACAGAAGATGCTTAGAATGTAAGCACAAATCAAAGAAGATTATTTTAACCTCTACAGGTGTAATTATTGGCTCAACTGTACTTGTTCTTTTATTTGGTGGAGTTTTTCAAATATACCGCTATTTTAAAATGAAAGACGAAGATCATGCAAGAATTGAAAACTTTTTAAAGGACTACAAGGCTTTAAAGCCAACTAGATTCTCTTATGCTGATATAAAGAGAATCACACATAAATTTAGAGATAGGTTAGGTGAAGGGGCTCATGGAACTGTTTATAAAGGTAAGTTGTCAAATGAGATTCAAGTTGCCGTGAAGATACTTAATAATGTAGAAGGAGATGGAAAGGATTTCATAAATGAAGTGGGAACCATGGGCAAAATCCACCACATCAATGTAGTTCGTTTGATTGGCTTTTGCGCGGATGGATTTCATCGTGCTTTAGTCTATGACTATTTTTCAAATGGTTCGTTGGATAAATTCATTTCTCCACCAAATAACAAAGATAATTTTCTTGGATGGGATAAGCTGCAACAAATTGCTCTAGGCATAGCAAATGGCATTGAGTATCTTCACCAAGGTTGTGATCAAACAATTCTACACTTTGACATCAATCCTTATAATGTCATGCTAGATGACAATTTCACTGCAAAGATTACAGATTTTGGTTTGGCTAAGATGTGTTCAAAAAATCAAAGTGTTGTATCAATGACTTCGGCTAAAGGAACATTAGGCTACATGGCACCTGAAGTTTTTTCTAGAAACTTTGGAAATGTCTCTTATAAGTCTGATATATACAGTTATGGTATGTTATTGTTGGAGATGGTTGGGGGAAGAAAGAACACAAAAATAACCGATGAAGAAGAAAATATTCAGATTATGTATCCAGAATGGATCCACAATTTACTTGAAGGGGGAGATATACAAATCTCTGTCGATGAAGAGGGTGACTTTAGAATTGCAAGAAAAATAGCGATTGTAGGACTTTGGTGTATCCAATGGCACCCTTTACATCGTCCAACAATTAAAACTGTGTTGCAAATGCTTCAAGGAGAAGGGGACAAATTAAAAGTACCAAGCAATCCTTTCGGACCTACAACTTCAACTAACACAATTGCTAATATTGTTGTAGAACGTATGAATTTGGAGCTAGATATGATTCAAGAGTTAGATTAG 1752 0.3664 MICNHISSFMLTILAITLLISLLANSEDVPFPSMACPFNLTCTHDNSMILELPAYPVPIRLLVKEINYTSHTLEACDAENCLPRLFLHHNFSSSIFPFRIHSWLDSGYQDLTNTSLFDCSSLGRRYLRKDIAYQQDMVSCPIYMAGFNENMVESCLVFCNKLSRPVSPLILSEDTVNGIQQNSISLSWSETIFHRRCLECKHKSKKIILTSTGVIIGSTVLVLLFGGVFQIYRYFKMKDEDHARIENFLKDYKALKPTRFSYADIKRITHKFRDRLGEGAHGTVYKGKLSNEIQVAVKILNNVEGDGKDFINEVGTMGKIHHINVVRLIGFCADGFHRALVYDYFSNGSLDKFISPPNNKDNFLGWDKLQQIALGIANGIEYLHQGCDQTILHFDINPYNVMLDDNFTAKITDFGLAKMCSKNQSVVSMTSAKGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKITDEEENIQIMYPEWIHNLLEGGDIQISVDEEGDFRIARKIAIVGLWCIQWHPLHRPTIKTVLQMLQGEGDKLKVPSNPFGPTTSTNTIANIVVERMNLELDMIQELD 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04721 583 Pfam Protein kinase domain 274 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04721 583 ProSiteProfiles Protein kinase domain profile. 270 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04721 583 PANTHER RUST RESISTANCE KINASE LR10-RELATED 241 558 IPR045874 GO:0004672
Vivi4g04721 583 FunFam PR5-like receptor kinase 345 552 - -
Vivi4g04721 583 Gene3D Phosphorylase Kinase; domain 1 244 344 - -
Vivi4g04721 583 SUPERFAMILY Protein kinase-like (PK-like) 254 541 IPR011009 -
Vivi4g04721 583 FunFam serine/threonine-protein kinase PBS1-like 237 344 - -
Vivi4g04721 583 Gene3D Transferase(Phosphotransferase) domain 1 345 551 - -
Vivi4g04721 583 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04721 Vivi-Chr4 176113236 176117011 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04721 213 564 Receptor kinase-like Gene Family AT1G66910 45.531 6.79e-103 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi4g04721 Pkinase 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04721 - - tpra:123893308 700.279