Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04718 ATGATTCTCAATCACATTTCTTCCTTCATGATGACAATATTAGCAATAATATCGCTAATGCCCCTGCTTGGAAATAGCGAGAATATCCCATCCCCTTCCATGAGATGCCCTTTCAAAATATCTTGTAAACATGATAACAAGATTATTGAACTACCTGCTTTCCCAGTACCTATAAAACTCCTCGTTAAGGAAATTAACTATACATCGCGAGTATTACAAACAAGCGACCCTGGAAATTGTCTTCCACGGCTCTTTCTTCGCCACAATTTCCCTTTGTCAATTTTTCCTTTACGGATTAGTTCTGTGTCGCCTTGGCGTTTGGGTTGGTATTGGGGTTGGGAAGAATCACTGGAATTTACCAATATTACTTTCTTTGATTGTTCTTCATTAGGACAGCGTTATCTGAGGAAAGACGTGGGGGTACCTGATCCCCAGCAGGACATGGTTTCTTGCCCAATTTATATGGCAGGATTTTACGAGGATATGGTTTCTTCAAACCTTGTATCCTGCACCAAACTGTCTCAACCAGTTTCCCCCCTTTCTCTTTCGGAACAAACGTTAGACGAGATACAATACCAAAGCTCAATCTCATTGTCATGGTCGGAAACAAATTTTGACAGAAAATGCTTAGAATGTAAGCACAAATCAAAGAAGAAGATTATTTTATCCTCTGCAGGAGCAATCATTGGCTCAACGGTACTTGTTCTTTTATTTGGTGGAGTTTTTCAAATATACCTCTATTTTAAAATGAAAGACGAAGATCATGCAAGAATTGAAAACTTTTTGAAGGATTACAAGGCTTTAAAGCCAACTAGATTCTCTTATGCTGATATAAAAAGAATCACACATAAATTTATAGATAAGTTAGGTGAAGGGGCTCATGGAACTGTTTATAAAGGTAAGTTGTCCAACCAGATTCAGGTTGCTGTAAAGATGCTTAATAATGTAGAAGGAGATGGGAAGGACTTCATAAATGAAGTGGGAACAATGGGCAAAATCCACCACATTAATGTAGTTCGTTTGCTTGGCTTTTGCGCGGATGGATTTCATCGTGCTTTAGTCTATGACTATTTTTCAAATGGTTCGTTGGATAAATTCATTTCTGCACTAAACAACAAAGATAATTTTCTTGGATGGGATAAATTACACCAAATTGCTCTAGGCATAGCAAATGGCATTGAGTATCTTCACCAGGGTTGTGATCAAACAATTCTACACTTTGACATCAATCCTCATAATGTCATGCTAGATGACAATTTCACTCCAAAGATTACAGATTTTGGTTTGGCTAAGATGTGTTCGAAAAATCAAAGTGTTGTATCAATGACTGCAGCTAAAGGAACATTAGGCTACATGGCACCTGAGGTTTTTTCTAGAAACTTTGGAAATGTCTCTTATAAGTCAGATATATACAGTTATGGTATGTTATTGTTGGAGATGGTTGGGGGAAGAAAGAATACAAAAATTATTGATGATGAAGAAAATATTCAGATTATGTATCCAGAATGGATCCATAATTTGCTTGAAGGAGGAGATATACAAATCCCTGTCGATGAAGAGGGTGATTTTAGAATTGCAAGAAAAATAGCAATTGTAGGACTTTGGTGTATCCAATGGCACCCTTTACATCGTCCAACAATGAAAACTGTGGTGCAAATGCTTCAAGGAGAAGAGGATAAATTAAAAGTGCCAAGCAATCCTTTCGAACCTACAACTTCAACTAATACCACAACTAATATTATTGTAGAACGTATGAATTTGGAACTGGATGTGATTCAAGAATTAGATTAG 1791 0.3696 MILNHISSFMMTILAIISLMPLLGNSENIPSPSMRCPFKISCKHDNKIIELPAFPVPIKLLVKEINYTSRVLQTSDPGNCLPRLFLRHNFPLSIFPLRISSVSPWRLGWYWGWEESLEFTNITFFDCSSLGQRYLRKDVGVPDPQQDMVSCPIYMAGFYEDMVSSNLVSCTKLSQPVSPLSLSEQTLDEIQYQSSISLSWSETNFDRKCLECKHKSKKKIILSSAGAIIGSTVLVLLFGGVFQIYLYFKMKDEDHARIENFLKDYKALKPTRFSYADIKRITHKFIDKLGEGAHGTVYKGKLSNQIQVAVKMLNNVEGDGKDFINEVGTMGKIHHINVVRLLGFCADGFHRALVYDYFSNGSLDKFISALNNKDNFLGWDKLHQIALGIANGIEYLHQGCDQTILHFDINPHNVMLDDNFTPKITDFGLAKMCSKNQSVVSMTAAKGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKIIDDEENIQIMYPEWIHNLLEGGDIQIPVDEEGDFRIARKIAIVGLWCIQWHPLHRPTMKTVVQMLQGEEDKLKVPSNPFEPTTSTNTTTNIIVERMNLELDVIQELD 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04718 596 ProSiteProfiles Protein kinase domain profile. 283 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04718 596 FunFam PR5-like receptor kinase 358 566 - -
Vivi4g04718 596 Gene3D Transferase(Phosphotransferase) domain 1 358 570 - -
Vivi4g04718 596 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Vivi4g04718 596 SUPERFAMILY Protein kinase-like (PK-like) 267 554 IPR011009 -
Vivi4g04718 596 Gene3D Phosphorylase Kinase; domain 1 257 357 - -
Vivi4g04718 596 PANTHER RUST RESISTANCE KINASE LR10-RELATED 254 572 IPR045874 GO:0004672
Vivi4g04718 596 Pfam Protein kinase domain 286 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04718 596 FunFam serine/threonine-protein kinase PBS1-like 250 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04718 Vivi-Chr4 176032378 176037170 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04718 249 567 Receptor kinase-like Gene Family AT1G66910 48.923 4.30e-105 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi4g04718 Pkinase 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04718 - - tpra:123893308 709.523