Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04713 ATGAAGGACGTGAAACGACACTCGCTGGAATCGTCTTTCTCACGAGTGGACTCGGTTGAGACGGTTAGGAAATTGGAGAATGTTCAGCGAAGGAGGTTGAAAATTCGGAGAATGAAGTATAGTTGTCAGGCGAAGATCCACGGCGGAGATGATTTTACCGTTGGGACAAAAACGGAGAGAGGAGAGATTCATGAATCGGTTGAGATATCTCTGACGCTGGCGAGTTCGTCGTCGTCAGAGGAAGAGGATCGGTCGTCGAAGCGGAATGATGAAGATAAAGATATATCGTATGGTTCGGTGTCGGTGATAGGAACTAGGAAGGAAATGGAGGATGCGGTGAGCGTTGAGTTAGGTTTTGCAGTGAAAGAAAATCAGAAGTGTGATTTCTTTGCTGTGTATGACGGTCACGGTGGAGCTCAGGTGGCGGAGGTTTGTAGAGAGAGGTTGCATCAGGTTGTGGCGGAGGAGATGGAGAGATGCGGAAATGACGTGGAATGGGACTGGGAGAGAGTGATGGAAGGGTGTTTTGGTAAAATGGATAGAGAGGTTGCGAGTAATGCAGCGGTTAGGACTGTGGGGACCACGGCTGTTGTGGCGGTTATGGCTAAGGGGGAGATTGTTGTTGCAAATTGCGGTGATTCTAGGGCGGTTTTGGGAAGAGGCGGCGAAGTTGTGGAGTTATCTAGTGATCATAAGCCAGAGAGACCTGATGAGTTGATGCGAATAGAAGAAGCTGGTGGAAGGGTCATAAACTGGAATGGTCACCGTGTTCTCGGTGTTCTTGCCACTTCACGATCTATAGGAGATGAGTATCTTCGACCATATGTAATATCAAAACCTGAAGTCACTGTAACAAAGAGAACCAGTGATGATGAATTTCTGATACTAGCAAGTGATGGTTTATGGGGTGTGATGTCTAGTGAAATTGCGTGCCAAGTTGTAAGGAAATGCTTCAAAGGGAAAATAAGGAGAGTTTGTGATGGGGTTGGGAATCAGACTAGTCGTGCTGCTGAAGCTGCAGCATTGTTGTCTGAGATAGCTTTGGCAAAGGGTAGCAGAGATAATATCAGTGTTATAGTTGTTGACCTAAGAGGAACATTAACATCTAGTTGA 1113 0.4654 MKDVKRHSLESSFSRVDSVETVRKLENVQRRRLKIRRMKYSCQAKIHGGDDFTVGTKTERGEIHESVEISLTLASSSSSEEEDRSSKRNDEDKDISYGSVSVIGTRKEMEDAVSVELGFAVKENQKCDFFAVYDGHGGAQVAEVCRERLHQVVAEEMERCGNDVEWDWERVMEGCFGKMDREVASNAAVRTVGTTAVVAVMAKGEIVVANCGDSRAVLGRGGEVVELSSDHKPERPDELMRIEEAGGRVINWNGHRVLGVLATSRSIGDEYLRPYVISKPEVTVTKRTSDDEFLILASDGLWGVMSSEIACQVVRKCFKGKIRRVCDGVGNQTSRAAEAAALLSEIALAKGSRDNISVIVVDLRGTLTSS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04713 370 Gene3D - 89 366 IPR036457 -
Vivi4g04713 370 PANTHER PROTEIN PHOSPHATASE 81 363 IPR015655 GO:0004722|GO:0006470
Vivi4g04713 370 MobiDBLite consensus disorder prediction 73 93 - -
Vivi4g04713 370 Pfam Protein phosphatase 2C 97 356 IPR001932 -
Vivi4g04713 370 CDD PP2Cc 95 363 IPR001932 -
Vivi4g04713 370 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Vivi4g04713 370 ProSiteProfiles PPM-type phosphatase domain profile. 96 363 IPR001932 -
Vivi4g04713 370 SMART PP2C_SIG_2 110 363 IPR001932 -
Vivi4g04713 370 SUPERFAMILY PP2C-like 93 364 IPR036457 -
Vivi4g04713 370 FunFam Protein phosphatase 2C 51 89 369 - -
Vivi4g04713 370 SMART PP2C_4 86 361 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04713 Vivi-Chr4 175943112 175945985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04713 84 364 PP2C-type Phosphatase Gene Family AT2G29380 51.316 2.81e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04713 K14497 - gmx:100807235 489.189