Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04693 ATGATTTGCAATCACATTTCTTCTTTCATGTTGACAATATTAGCAATAACTTTGCTAATATCGCTGCTTGCAAATAGCGAGGATGTCCCATTCCCATCCATGGCATGTCCTTTCAATCTAACCTGCACACATGATAACAGCATGATTCTTGAACTACCAGCATACCCAGTACCTATAAGACTCCTCGTCAAAGAAATTAACTACACATCGCATACATTAGAAGCATGCGATGCTGAAAATTGTCTTCCACGCCTCTTTCTTCACCACAATTTCTCTTCATCAATTTTTCCTTTTCGGATTCATTCTTGGTTGGATTCGGGATACCAGGATCTTACCAATACTAGCTTATTCGATTGTTCTTCATTAGGACGGCGTTATCTGAGGAAAGACATAGCTTACCAGCAGGACATGGTTTCTTGTCCAATTTATATGGCAGGATTTAACGAGAATATGGTTGAATCATGCCTTGTTTTCTGCAACAAACTGTCTCGACCAGTTTCGCCCCTTATTCTTTCGGAAGATACGGTAAATGGGATACAACAAAACTCAATCTCACTGTCATGGTCGGAAACAAATTTTCACAGAAGATGCTTAGAATGTAAGCACAAATCAAAGAAGATTATTATTTTAACCTCTACAGGTGTAATTATTGGCTCAACTGTACTTGTTTTTTTATTTGGTGGAGTTTTTCAAATATACCGCTATTTTAAAATGAAAGACGAAGATCATGCAAGAATTGAAAACTTTTTGAAGGACTACAAGGCTTTAAAGCCAACTAGATTCTCTTATGCTGATATAAAGAGAATCACACATAAATTTAGAGATAAGTTAGGTGAAGGGGCTCATGGAACTGTTTATAAAGGTAAGTTGTCAAACGAGATTCAAGTTGCCGTGAAGATACTTAATAATGTAGAAGGAGATGGAAAGGATTTCATAAATGAAGTGGGAACCATGGGCAAAATCCACCACATCAATGTAGTTCGTTTGCTTGGCTTTTGCGCGGATGGATTTCATCGTGCTTTAGTCTATGACTATTTTTCAAATGGTTCATTGGATAAATTCATTTCTCCACCTAATAACAAAGATAATTTTCTTGGATGGGATAAGCTACAACAAATTGCTCTAGGCATAGCAAATGGCATTGAGTATCTTCACCAAGGTTGTGATCAAACAATTCTACACTTTGACATCAATCCTCATAATGTCATGCTAGATGACAATTTCACTCCAAAGATTACAGATTTTGGTTTGGCTAAGATGTGTTCGAAAAATCAAAGTGTTGTATCCATGACTGCAGCTAAAGGAACATTAGGCTACATGGCACCTGAAGTTTTTTCTAGAAACTTTGGAAATGTCTCTTATAAGTCTGATATATACAGTTATGGTATGTTATTGTTGGAAATGGTTGGGGGAAGAAAGAACACAAAAATAACCGATGAAGAAGAAAATATTCAGATTATGTATCCAGAATGGATCCACGATTTACTTGAAGGGGGAGATATACAAATCTCTGTCGATGAAGAGGGTGACTTTAGAATTGCAAGAAAAATAGCGATTGTAGGACTTTGGTGTATCCAATGGCACCCTTTACATCGTCCAACAATGAAAACTGTGGTGCAAATGCTTCAAGGAGAAGGGGACAAATTAAAAGTACCAAGCAATCCTTTCGGACCTACAACTTCAACTAATATAATTGCTAATATTGTTGTAGAACGTATGAATTTGGAGCTAAATGTGATTCAAGAATTAGATTAG 1755 0.3664 MICNHISSFMLTILAITLLISLLANSEDVPFPSMACPFNLTCTHDNSMILELPAYPVPIRLLVKEINYTSHTLEACDAENCLPRLFLHHNFSSSIFPFRIHSWLDSGYQDLTNTSLFDCSSLGRRYLRKDIAYQQDMVSCPIYMAGFNENMVESCLVFCNKLSRPVSPLILSEDTVNGIQQNSISLSWSETNFHRRCLECKHKSKKIIILTSTGVIIGSTVLVFLFGGVFQIYRYFKMKDEDHARIENFLKDYKALKPTRFSYADIKRITHKFRDKLGEGAHGTVYKGKLSNEIQVAVKILNNVEGDGKDFINEVGTMGKIHHINVVRLLGFCADGFHRALVYDYFSNGSLDKFISPPNNKDNFLGWDKLQQIALGIANGIEYLHQGCDQTILHFDINPHNVMLDDNFTPKITDFGLAKMCSKNQSVVSMTAAKGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKITDEEENIQIMYPEWIHDLLEGGDIQISVDEEGDFRIARKIAIVGLWCIQWHPLHRPTMKTVVQMLQGEGDKLKVPSNPFGPTTSTNIIANIVVERMNLELNVIQELD 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04693 584 Gene3D Phosphorylase Kinase; domain 1 245 345 - -
Vivi4g04693 584 FunFam serine/threonine-protein kinase PBS1-like 238 345 - -
Vivi4g04693 584 PANTHER RUST RESISTANCE KINASE LR10-RELATED 242 559 IPR045874 GO:0004672
Vivi4g04693 584 SUPERFAMILY Protein kinase-like (PK-like) 255 542 IPR011009 -
Vivi4g04693 584 ProSitePatterns Protein kinases ATP-binding region signature. 277 299 IPR017441 GO:0005524
Vivi4g04693 584 Gene3D Transferase(Phosphotransferase) domain 1 346 552 - -
Vivi4g04693 584 ProSiteProfiles Protein kinase domain profile. 271 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04693 584 Pfam Protein kinase domain 274 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g04693 584 FunFam PR5-like receptor kinase 346 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04693 Vivi-Chr4 175607841 175610516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04693 214 555 Receptor kinase-like Gene Family AT1G66910 47.414 2.56e-105 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi4g04693 Pkinase 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04693 - - tpra:123893308 710.679