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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vivi4g04684
ATGAATCAACAACAACAACATAGTATGAATATCCTATGTAAAACCACAGTACACGAAAGTGTTACTAAGAAATACATAAAACCGAAGAGAAACATCAATGCAAGAAACAACACCAACAACAAAAACTCTATTCAAACCGAATTACCGAAAGTGATTCGCGTAATAGCAACTGATCCAGATGCTACTGATACTGATTCATCCAGTGATGAATCAGTATCACAGTTTTCCAACCCTCGGAGAATCAGAATCAAACAGTATGTCAACAAAATTGAAATCGAAACCGTCGCTTCGACGGTTTCGGCCTCGACAGTTTCCCGAAACAAGAAAAGATCAGAACTTAAGTCTTCCCGGAGACCGGCGAAGGTACAAGCCATCACTGGAGACGAGAGAAAATTCCGAGGTGTACGGATGAGGCCGTGGGGAAAATGGGCTGCGGAGATTCGAGATCCTGCCAGCCGTGTACGATTGTGGCTGGGAACTTTCAGCACCGCAGAAGAAGCTGCTAAGGTTTACGATGCTGCAGCTATTAAGTTTCGTGGTAAGGACGCTGTCACCAACTTTTCAATGGTTGAGGAGAATGTTGAAAAAGATGAAGTTGTTAACAGAACGACGACAATGAAGGTTGAAGAAATCAAAACCGAAATTTCCGTTTCCGGCGAAGATTCCGGCGATGAGTTTGTTAATCTTTCTTCTCCAACTTCTGTTCTCCGGTTCAGACATGATGAGATTCATGAATCAAATAAACCGGTTGAACCAGTTATTGAAGATGAACCGGTCGAACCAAACGAACCGGTTGGTGAATGTGAACCGAGTTTTTTTGACGAAACTAATGAGATATTCCGACAGGAAATGGAGGACGTGTTTAATTTTCCAACAACTTCTGATTACTATTACTCAAACATGTTTGAAGAAGCTCCTATGCAATTTGTTCATGAAACGACACCGGTTCTGTTTAATGAGTGTCGTTTCAGTGATCACGTGGAAATTAATAAAACGCACTCACCATCATCACCATCATCATCAGCTTTATGTGAAGGGGATGATTTTCTGGATGACATTTTGTTAGGTTTAGAGCCTCTCATTGCGCTTTGA
1092
0.4167
MNQQQQHSMNILCKTTVHESVTKKYIKPKRNINARNNTNNKNSIQTELPKVIRVIATDPDATDTDSSSDESVSQFSNPRRIRIKQYVNKIEIETVASTVSASTVSRNKKRSELKSSRRPAKVQAITGDERKFRGVRMRPWGKWAAEIRDPASRVRLWLGTFSTAEEAAKVYDAAAIKFRGKDAVTNFSMVEENVEKDEVVNRTTTMKVEEIKTEISVSGEDSGDEFVNLSSPTSVLRFRHDEIHESNKPVEPVIEDEPVEPNEPVGECEPSFFDETNEIFRQEMEDVFNFPTTSDYYYSNMFEEAPMQFVHETTPVLFNECRFSDHVEINKTHSPSSPSSSALCEGDDFLDDILLGLEPLIAL
363
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vivi4g04684
363
MobiDBLite
consensus disorder prediction
101
122
-
-
Vivi4g04684
363
PANTHER
SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR
48
268
-
-
Vivi4g04684
363
CDD
AP2
131
187
IPR001471
GO:0003700|GO:0006355
Vivi4g04684
363
SUPERFAMILY
DNA-binding domain
131
188
IPR016177
GO:0003677
Vivi4g04684
363
SMART
rav1_2
131
194
IPR001471
GO:0003700|GO:0006355
Vivi4g04684
363
FunFam
Ethylene-responsive transcription factor 2
130
189
-
-
Vivi4g04684
363
PRINTS
Ethylene responsive element binding protein signature
132
143
IPR001471
GO:0003700|GO:0006355
Vivi4g04684
363
PRINTS
Ethylene responsive element binding protein signature
154
170
IPR001471
GO:0003700|GO:0006355
Vivi4g04684
363
Gene3D
AP2/ERF domain
130
190
IPR036955
GO:0003700|GO:0006355
Vivi4g04684
363
ProSiteProfiles
AP2/ERF domain profile.
131
188
IPR001471
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vivi4g04684
Vivi-Chr4
175205772
175207552
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vivi4g04684
13
355
AP2-EREBP Transcription Factor Family
AT4G27950
35.393
2.52e-45
156
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2 or ERF-ERF
Vivi4g04684
AP2
5.4e-11
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vivi4g04684
-
-
psat:127091686
510.76
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