Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi4g04684 | ATGAATCAACAACAACAACATAGTATGAATATCCTATGTAAAACCACAGTACACGAAAGTGTTACTAAGAAATACATAAAACCGAAGAGAAACATCAATGCAAGAAACAACACCAACAACAAAAACTCTATTCAAACCGAATTACCGAAAGTGATTCGCGTAATAGCAACTGATCCAGATGCTACTGATACTGATTCATCCAGTGATGAATCAGTATCACAGTTTTCCAACCCTCGGAGAATCAGAATCAAACAGTATGTCAACAAAATTGAAATCGAAACCGTCGCTTCGACGGTTTCGGCCTCGACAGTTTCCCGAAACAAGAAAAGATCAGAACTTAAGTCTTCCCGGAGACCGGCGAAGGTACAAGCCATCACTGGAGACGAGAGAAAATTCCGAGGTGTACGGATGAGGCCGTGGGGAAAATGGGCTGCGGAGATTCGAGATCCTGCCAGCCGTGTACGATTGTGGCTGGGAACTTTCAGCACCGCAGAAGAAGCTGCTAAGGTTTACGATGCTGCAGCTATTAAGTTTCGTGGTAAGGACGCTGTCACCAACTTTTCAATGGTTGAGGAGAATGTTGAAAAAGATGAAGTTGTTAACAGAACGACGACAATGAAGGTTGAAGAAATCAAAACCGAAATTTCCGTTTCCGGCGAAGATTCCGGCGATGAGTTTGTTAATCTTTCTTCTCCAACTTCTGTTCTCCGGTTCAGACATGATGAGATTCATGAATCAAATAAACCGGTTGAACCAGTTATTGAAGATGAACCGGTCGAACCAAACGAACCGGTTGGTGAATGTGAACCGAGTTTTTTTGACGAAACTAATGAGATATTCCGACAGGAAATGGAGGACGTGTTTAATTTTCCAACAACTTCTGATTACTATTACTCAAACATGTTTGAAGAAGCTCCTATGCAATTTGTTCATGAAACGACACCGGTTCTGTTTAATGAGTGTCGTTTCAGTGATCACGTGGAAATTAATAAAACGCACTCACCATCATCACCATCATCATCAGCTTTATGTGAAGGGGATGATTTTCTGGATGACATTTTGTTAGGTTTAGAGCCTCTCATTGCGCTTTGA | 1092 | 0.4167 | MNQQQQHSMNILCKTTVHESVTKKYIKPKRNINARNNTNNKNSIQTELPKVIRVIATDPDATDTDSSSDESVSQFSNPRRIRIKQYVNKIEIETVASTVSASTVSRNKKRSELKSSRRPAKVQAITGDERKFRGVRMRPWGKWAAEIRDPASRVRLWLGTFSTAEEAAKVYDAAAIKFRGKDAVTNFSMVEENVEKDEVVNRTTTMKVEEIKTEISVSGEDSGDEFVNLSSPTSVLRFRHDEIHESNKPVEPVIEDEPVEPNEPVGECEPSFFDETNEIFRQEMEDVFNFPTTSDYYYSNMFEEAPMQFVHETTPVLFNECRFSDHVEINKTHSPSSPSSSALCEGDDFLDDILLGLEPLIAL | 363 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi4g04684 | 363 | MobiDBLite | consensus disorder prediction | 101 | 122 | - | - | |
Vivi4g04684 | 363 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 48 | 268 | - | - | |
Vivi4g04684 | 363 | CDD | AP2 | 131 | 187 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi4g04684 | 363 | SUPERFAMILY | DNA-binding domain | 131 | 188 | IPR016177 | GO:0003677 | |
Vivi4g04684 | 363 | SMART | rav1_2 | 131 | 194 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi4g04684 | 363 | FunFam | Ethylene-responsive transcription factor 2 | 130 | 189 | - | - | |
Vivi4g04684 | 363 | PRINTS | Ethylene responsive element binding protein signature | 132 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi4g04684 | 363 | PRINTS | Ethylene responsive element binding protein signature | 154 | 170 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi4g04684 | 363 | Gene3D | AP2/ERF domain | 130 | 190 | IPR036955 | GO:0003700|GO:0006355 | |
Vivi4g04684 | 363 | ProSiteProfiles | AP2/ERF domain profile. | 131 | 188 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi4g04684 | 363 | Pfam | AP2 domain | 131 | 180 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi4g04684 | Vivi-Chr4 | 175205772 | 175207552 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi4g04684 | 13 | 355 | AP2-EREBP Transcription Factor Family | AT4G27950 | 35.393 | 2.52e-45 | 156 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Vivi4g04684 | AP2 | 5.4e-11 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi4g04684 | - | - | psat:127091686 | 510.76 |