Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04637 ATGGTGCCTCCGGGGCCACCTACTCCGATTGGTGGTGCCCAATCTGGGACTCCTTCACTTATGAGATCGAATTCGGGGATGATGGGGGGTCAAGGTGGACAAGCTTCGTTTCCTTCGTTGGTTTCTCAGCGAAATCAGTATAATAACATGAACATGTTAGGGAACATGTCTAATGTTGCTTCTATGATGAATCAGTCTTTTTCCAATGGGATTCCAAACTCGGGACTTGGTGGATTGGGAAATAGTCAACGGGGTGGTATGGAGGCTGGGGCTGAACAGGACCCTTTGTCTGGTGTTGGCAATGGAATGGGATTTGGTAATCCTTCGTCGTCGTTTGGGCAATCAAATATGGCTAACCCTGGTTCATCTGGTCAAGGACAAGGTCAAGGTCAGGGTCAGCAATTTTCTAACCCTTCTGGTAACCAGTTGTTGTCGGATCAACAGCATTCCCAACAACATGATGTTCAGAATTTCCAACATGGTCAGCAGCAGTCAGGGCAGCAGTTTTCGGCTCCAATGAACTCTCAACAACAACAACAACATCAGCAGCAGCAACATTTTCAATCAATGCGAGGAGGTATAGGTGGTATTGGACCTGTGAAGATGGAGCCTCAAGGAAACAACGATCAGTTTGGGCAGCAGTTGCCATCACCGAGGAATCTTGCTCAGGTGAAATTGGAACCACAACAACTTCAATCAATGAGAGGTATGGCACCTATTAAAATGGAGCCCCAGCATAGTGATCAACCATTTTTGCATCAACAGCAACAACAGCAACAACAACAGCAGCAGCAACAACTCCTCCATATGTCAAGGCAAACCTCTCAAGCTACTGCTGCACAGATGAATCTTTTACAACAACAGAGACTAATGCAATATCAACAACATCAGCAGCAGCAACTCTTAAAGTCAATGCCTCAGCAGCAACGGTCCCAGCTACCCCAACAGTTTCAACAGCAGAATATGCCTATAAGGTCTCCTGTAAAACCAGCATATGAACCTGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAACATTGATTTCTGGAGGAAATTTGTCGCCGAGTACTTTGCTCCTAATGCCAAAAAGAAGTGGTGCGTTTCCATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCTCAGGATATATGGCACTGTGAAATATGTAATCGTAAACCTGGTCGCGGGTTTGAGGCTACTGCTGAAGTTCTTCCCAGGCTTTTCAAAATTAAGTATGAAAGTGGTACTTTAGAAGAGCTCTTGTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCCAAAGCAATACAAGAAAGTGTTTTTGAACAACTCCGCGTTGTCCGGGATGGCCAACTTCGAATAGTTTTCTCCCCAGATCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGTCATGAAGAGCTCATCCCCAGAAGATTGTTAATTCCTCAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATATCAGGCATGTACACAAAATGCAGCACCCAATCTATCCATTCCAGAGTTGCAAAATAATTGCAATTTGTTTGTTGCATCAGCCCGTCAGCTGGCAAAAGCCTTAGAAGTTCCATTGGTTAATGATTTAGGATACACAAAGAGATATGTGCGGTGCCTACAAATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAGGAACTGGACCTATGGACAGCTTGTCCAAATTCCCTCGGAGAACAAATAATTCATCTGCACTTCATAGTCAGGCGCAACAGTCTGAAGATCAATTACAGCAGCAACAACAGCATATGGCGTCCCATAACTCAAATGGTGATCAGAACTCTGTGCAAGCTGCTGCCATGCAAATTCCTTCCAACAATGGTGTGGCAAGTGTAAATAACAATGTCAATTCAGCATCTGCTTCGACTACCACAAGCACCATTGTTGGACTTCTCCATCAGAACTCTATGAATGCTAGGCAGCAAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAATTCTTCCCATGTTCCATCCCCAGGTTCATGCAATAACACAGTGCCACAAGGGCAACCAAACTCGTCCCCTTTTCATTCACCTACACCGTCCTCATCTAACAATCCTCAAAATTCTCATCCGGGTATACCATCTGCAAATCACATGGGTGCAGCAAGCTCACCAGCTAATATTTCCTTGCAACAACAACAAACATCTATTTCCGGTGAAGCCGACCCAAGTAACGATGCTCAGAACTCGGTCCAGAAAATCATTCATGAGATGATGATGTCCTCTCAGATGAACGGAACAGGTGGAATGGTAGGTGCTAATTCTCTTGGAAATGACATGAAGAATGTAAATGGTATCCTACCAGGGAGTACTAATACTGGCCTAAACGGTGGCAATGGCATGATGGGTAATGGAGGCGTGAACAATAATCCTGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGTTTACCCAATGGAATGAGGCCAGGAATGGGAAATAATTCAGTCATGAATGGAAGAGTAGGAATGTCATCGATAACTCGGGAACAGGCTATGAATCATCAACAGGATTTGTCAAGCCAACTGCTTAGTGGGTTTCAATTTGATTAG 2700 0.4437 MVPPGPPTPIGGAQSGTPSLMRSNSGMMGGQGGQASFPSLVSQRNQYNNMNMLGNMSNVASMMNQSFSNGIPNSGLGGLGNSQRGGMEAGAEQDPLSGVGNGMGFGNPSSSFGQSNMANPGSSGQGQGQGQGQQFSNPSGNQLLSDQQHSQQHDVQNFQHGQQQSGQQFSAPMNSQQQQQHQQQQHFQSMRGGIGGIGPVKMEPQGNNDQFGQQLPSPRNLAQVKLEPQQLQSMRGMAPIKMEPQHSDQPFLHQQQQQQQQQQQQQLLHMSRQTSQATAAQMNLLQQQRLMQYQQHQQQQLLKSMPQQQRSQLPQQFQQQNMPIRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDIWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQACTQNAAPNLSIPELQNNCNLFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLSKFPRRTNNSSALHSQAQQSEDQLQQQQQHMASHNSNGDQNSVQAAAMQIPSNNGVASVNNNVNSASASTTTSTIVGLLHQNSMNARQQNSMNNASSPYGGNSSHVPSPGSCNNTVPQGQPNSSPFHSPTPSSSNNPQNSHPGIPSANHMGAASSPANISLQQQQTSISGEADPSNDAQNSVQKIIHEMMMSSQMNGTGGMVGANSLGNDMKNVNGILPGSTNTGLNGGNGMMGNGGVNNNPGVGVGGYGTMGLGPSGLPNGMRPGMGNNSVMNGRVGMSSITREQAMNHQQDLSSQLLSGFQFD 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04637 899 MobiDBLite consensus disorder prediction 753 772 - -
Vivi4g04637 899 MobiDBLite consensus disorder prediction 244 274 - -
Vivi4g04637 899 PANTHER LIM DOMAIN-BINDING PROTEIN 207 896 IPR029005 -
Vivi4g04637 899 MobiDBLite consensus disorder prediction 595 636 - -
Vivi4g04637 899 MobiDBLite consensus disorder prediction 248 274 - -
Vivi4g04637 899 MobiDBLite consensus disorder prediction 73 216 - -
Vivi4g04637 899 Pfam LIM-domain binding protein 340 594 IPR029005 -
Vivi4g04637 899 MobiDBLite consensus disorder prediction 1 38 - -
Vivi4g04637 899 MobiDBLite consensus disorder prediction 587 636 - -
Vivi4g04637 899 MobiDBLite consensus disorder prediction 683 748 - -
Vivi4g04637 899 MobiDBLite consensus disorder prediction 103 190 - -
Vivi4g04637 899 MobiDBLite consensus disorder prediction 12 38 - -
Vivi4g04637 899 Coils Coil 611 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04637 Vivi-Chr4 174364584 174371978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04637 1 812 C2H2 Transcription Factor Family AT1G43850 58.885 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04637 - - gmx:100798031 1183.32