Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04625 ATGTCGTTGATTATATCTTCGGAGTTGGCTGATGCATCGTACAGGAATGCCAAACTATACTCGCTAAAGGGAACTGATGTTGCACCTGGTTTGTCCTCCCATAATTTCGTTCCAGATAAGCACAGAAGCATGTACATGGATGATCCTTACTCGAGTGAGAGTTATGAAAAATACTTCCTTGATTCTCCTACAGAAGAACTGGTAGAACCGTCGAGTTCTGGTGTATCGGGAAATTCGATTCACGCTGAGTGTGATTCTTACCAGATTAGAGCTAGTTCTGGGACTTCTGTGGTCACTGATAACCCGTTTGATACTTATGTTTCATCGACAAGGCTTCGTGGTGACTATCAGTCGAACTTTGAATCGGATTTATTGGAAAACGAGAGCCCGGATTGCTTTGAGTTTGATGGTGAAATGCGATTGAAATTGCAAGAACTGGAGAGGGCGTTGCTTAGTGACAATAATGATGATTGTGATGATGATGATGAGGAAAACATGTTTAGAACTGTACAAAGCATGGACATTGATCCTGACTTAGCCGATTGTGCCAATCTCGTTCAGAACATGTCACATCATGACTCGCCGAAGGAATGTTTGTCATCAGATTCAAATCTTAGTAGCAGCAGTTGCACCAAAGAAATCTCACAAATCTCTCCTCGGACGCCGAAGCAGTTACTTTATGAATGTGCTAGTGCACTTTCAGAAGGAAATGAAGGAAAAGCCTCGGCTATGATAGATGATCTCAGGCAGATGGTTTCGATTAATGGAGATCCTTCCGAAAGAATTGCGGCCTACATGGTGGAAGGGCTAGCGGCTCGTTTGGCTTCATCTGGAAAATGTATTTATAAAGCTTTGAAATGCAAGGAACCTCCTTCTTCCGATCGTCTAGCATCAATGCAGATCCTATTCGAGGTGTGCCCGTGTTTTAAATTTGGATTTATCGCAGCAAATGGTGCTATTGCTGAGGCTATTAAAGACGATAAGAGGGTTCACATAATAGATTTTGATATCAACCAAGGAAGCCAATATATAACCCTTATACAAACACTTGCTTCTAGGCCAGGTAAGCCGCCTTTTGTGAGATTGACCGGCGTTGACGATCCTGAATCCGTGCAACGATCTGTTGGAGGCCTGAGTATCATAGGACAAAGGCTTGAAAAGCTTGCAGAAATACTCGGATTGCCATTTGAGTTCCGAGCCGTAGCATCAAGTTCTTCAATTGTTACTCCATCAATGCTGAACTGTCGTCCCGGGGAAGCAATCGTGGTGAACTTTGCATTCCAGCTTCATCACATGCGCGACGAAAGTGTATCAACGGTAAACGAACGGGACCAGCTTCTCCGCATGGTTAAGAGCCTTAAACCAAAACTTGTAACAGTCGTGGAACAAGACGTGAACACAAACACTTCCCCATTTCTCCCTAGATTCGTCGAAGCCTACAATTACTACTCTGCTGTGTTTGAGTCCCTCGACGCCACTCTTCCGAGAGAGAGCCAAGATAGAGTGAATGTTGAAAGGCAATGCTTGGCAAGGGACATTGTGAATATCATCGCGTGCGAAGGCGAGGAGAGGATAGAACGGTATGAAGTAGCTGGAAAATGGAGGGCAAGGATGAGAATGGCAGGATTCATTTCATCACCAATGAGTACAAATGTGGAAGAAGCAATTAGGGAACTCATTAGGCAGTACTGTGACAAGTACAAGATAAAAGAGGAAATGGGAGCACTTCATTTTGGATGGGAAGACAAAAACTTGATTGTTGCTTCAGCTTGGAAGTAA 1779 0.4384 MSLIISSELADASYRNAKLYSLKGTDVAPGLSSHNFVPDKHRSMYMDDPYSSESYEKYFLDSPTEELVEPSSSGVSGNSIHAECDSYQIRASSGTSVVTDNPFDTYVSSTRLRGDYQSNFESDLLENESPDCFEFDGEMRLKLQELERALLSDNNDDCDDDDEENMFRTVQSMDIDPDLADCANLVQNMSHHDSPKECLSSDSNLSSSSCTKEISQISPRTPKQLLYECASALSEGNEGKASAMIDDLRQMVSINGDPSERIAAYMVEGLAARLASSGKCIYKALKCKEPPSSDRLASMQILFEVCPCFKFGFIAANGAIAEAIKDDKRVHIIDFDINQGSQYITLIQTLASRPGKPPFVRLTGVDDPESVQRSVGGLSIIGQRLEKLAEILGLPFEFRAVASSSSIVTPSMLNCRPGEAIVVNFAFQLHHMRDESVSTVNERDQLLRMVKSLKPKLVTVVEQDVNTNTSPFLPRFVEAYNYYSAVFESLDATLPRESQDRVNVERQCLARDIVNIIACEGEERIERYEVAGKWRARMRMAGFISSPMSTNVEEAIRELIRQYCDKYKIKEEMGALHFGWEDKNLIVASAWK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04625 592 ProSiteProfiles GRAS family profile. 213 592 IPR005202 -
Vivi4g04625 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 205 587 IPR005202 -
Vivi4g04625 592 Pfam GRAS domain family 223 592 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04625 Vivi-Chr4 174248970 174252108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04625 1 592 GRAS Transcription Factor Family AT1G21450 62.645 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi4g04625 GRAS 5.6e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04625 - - gmx:100807048 915.22