Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04612 ATGATAGAATTACACAAGATGGATAGTGATGTTCTTGTTGGACATAATATTTCAGGATTCGACCTGGATGTTCTTCTCCACAGATCTCAGGCTTGCAAGGTCCCAAGCAGCTTGTGGTCTAAACTTGGCCGTCTCAACCGATCCACAATGCCTAAGCTCGAAAGAAGAGGCAAAACATTTGGTTTTGGAACTGATCCTGCTATCATGTCCTGCGTTGCCGGTCGGCTTCTTTGTGATACTTATTTGTGTTCCCGTGACCTATTAAAGGAGGTTAGTTATTCTTTAACTCACCTTGCAAAAACACAGCTGAACCAGTCTCGGAAGGAAGTTGCTCCACATGACATTCCAAAAATGTTCCAATCCGCAAAATCCCTGATGGAGCTAGAATGGGACACGCAAGAAGCATCTCAGATCGTTAACATTTGCATTATTAGCGGCCAAGTACTTAAAACAGTTATAAAACAACATTGTGTTTGCAGCAGATGCTTTGCATTGGATACTTGA 504 0.4246 MIELHKMDSDVLVGHNISGFDLDVLLHRSQACKVPSSLWSKLGRLNRSTMPKLERRGKTFGFGTDPAIMSCVAGRLLCDTYLCSRDLLKEVSYSLTHLAKTQLNQSRKEVAPHDIPKMFQSAKSLMELEWDTQEASQIVNICIISGQVLKTVIKQHCVCSRCFALDT 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04612 167 Gene3D - 1 145 IPR036397 GO:0003676
Vivi4g04612 167 SUPERFAMILY Ribonuclease H-like 4 125 IPR012337 -
Vivi4g04612 167 Pfam DNA polymerase family B, exonuclease domain 4 96 IPR006133 -
Vivi4g04612 167 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 2 143 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04612 1 128 Core DNA Replication Machinery Family AT5G67100 72.656 1.01e-59 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04612 K02320 - vvo:131598344 340.502