Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04588 ATGACGACACAATCGGAGAATACCTTGACGGTTGAAGCTGCGTCGACACTGGTGAATGAACTCAGAGCAACATTTGCTTCCGGCGAAACACGGAGTTACAAATGGAGAATTTCGCAACTAAAGCAACTCTATAAGATTGCTGAGCATCACGAACAAGAAATCGTAGATGCTCTTCTTAGCGACGTCGGTAAACCGCCGCTCGAAACGGTTGCTTACGAGATTGCTATGTTGAAAAACTCATCTAAAACTGCAATCAAGGAATTGAAGCGGTGGATGGCTCCGGAAAAGGTCCCAACATCCCTCACTACATTTCCTGCTTCAGCTGAAATAGTATCTGAACCACTTGGAGTTGTGTTGGTCATCTCTGCATGGAACTATCCATTTTTACTGTCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCTGTGGTCTTAAAACCATCAGAAATTGCTCCAGCCACATCAGCATTGCTAGCAAAACTGGTAGGGGAGTACATGGATAACTCATCTATACGAGTTGTTGAGGGAGCAGTTGATGAAACATCAGCATTACTGCAACAAAAGTGGGATAAAATTTTCTATACAGGTAATGGAAGAGTGGGACGCATTGTGATGGCGGCTGCTGCTAAGCACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCCCCTGTTGTTGTTGATTCAAAGTCAAATATCAACTTACAGGTTACAACTAGAAGGATAATTGCTGGAAAATGGGGTTGCAACAACGGACAGGCTTGCATTTCTCCTGATTATATTATAACCACAAAAGACTATGCTCCTAAGTTGGTGGATGCTCTAAAGACTGAATTGGAAAGTTTTTACGGAAAGAATCCTTTGGAATCAAAAGATTTGTCACGTATTGTAAACTCGAACCACTTTGCTCGTCTGACTAAGCTTTTGGATGATGATAAAGTTTCTGGTAAGATTGTTCATGGAGGTGAAAAGGATGAAACCAAATTGAGAATTAGCCCTACTCTTCTATTAGACGTTCCGCGAGATTCTCTAATAATGAGTGAAGAGATATTTGGTCCTTTACTTCCCATCGTCACAGTGGATAAAATAGAAGAAAGCTTTGATGTGATAAACTCAGGACCAAAGCCTCTTGCTGCATATATATTTACCAACAATAAGAATCTCAAGGAGAAGTTTGTTAAGACGATTTCTGCTGGTGGTTTGGTCATCAACGACACTACTATACACCTTGCGGTTCATACTCTACCTTTTGGAGGAGTAGGTGATAGTGGAGTTGGTGCATACCATGGAAAATTCTCGTTTGATGCATTTAGCCACAAAAAAGCAGTTCTTTATCGCAGTTTTTTCGGTGATGCTTCTATAAGGTATCCACCATACACCAAAACAAAGTATAGATTGATGAAGGCTCTCATGACTGGCAGCATAATTGGTATAATTCGTGCTATATTTGGAAAGTCCTAG 1467 0.4131 MTTQSENTLTVEAASTLVNELRATFASGETRSYKWRISQLKQLYKIAEHHEQEIVDALLSDVGKPPLETVAYEIAMLKNSSKTAIKELKRWMAPEKVPTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSALLAKLVGEYMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSKSNINLQVTTRRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKTELESFYGKNPLESKDLSRIVNSNHFARLTKLLDDDKVSGKIVHGGEKDETKLRISPTLLLDVPRDSLIMSEEIFGPLLPIVTVDKIEESFDVINSGPKPLAAYIFTNNKNLKEKFVKTISAGGLVINDTTIHLAVHTLPFGGVGDSGVGAYHGKFSFDAFSHKKAVLYRSFFGDASIRYPPYTKTKYRLMKALMTGSIIGIIRAIFGKS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04588 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 443 IPR016162 GO:0016491
Vivi4g04588 488 FunFam Aldehyde dehydrogenase 22 226 - -
Vivi4g04588 488 SUPERFAMILY ALDH-like 17 460 IPR016161 GO:0016491
Vivi4g04588 488 Pfam Aldehyde dehydrogenase family 11 445 IPR015590 GO:0016491
Vivi4g04588 488 CDD ALDH_F3FHI 14 447 - -
Vivi4g04588 488 PIRSF ALDH 1 484 IPR012394 GO:0006081
Vivi4g04588 488 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 219 226 IPR029510 GO:0016491
Vivi4g04588 488 FunFam Aldehyde dehydrogenase 223 425 - -
Vivi4g04588 488 PANTHER ALDEHYDE DEHYDROGENASE 12 479 IPR012394 GO:0006081
Vivi4g04588 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 223 425 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04588 Vivi-Chr4 173753562 173758503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g04588 74 486 Aldehyde Dehydrogenase Gene Family AT1G44170 74.576 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04588 K00128 - gmx:100816594 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04588 4 173753562 173758503 Vivi4g04588 4 173753562 173758503 ECH